DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31689 and ABCG41

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001329357.1 Gene:ABCG41 / 827186 AraportID:AT4G15215 Length:1397 Species:Arabidopsis thaliana


Alignment Length:663 Identity:165/663 - (24%)
Similarity:292/663 - (44%) Gaps:138/663 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PFNIIFEDLYYRVEV--GKDREKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNILTG-LTKSG 82
            |..:.|:::.|.:|.  ||.|:   :|..|.|..|.|.||::||.|||||::|:::|:| .|:..
plant   802 PLTVTFQNVQYYIETPQGKTRQ---LLFDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGI 863

  Fly    83 VSGKIEIGKARK-------LCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLKEKRTLIDYL 140
            :.|:|.:|...|       :.||..|.|...|..||||::..:|.|::... :..|.|..|:..:
plant   864 IKGEIRVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYN-IDAKTKNELVKEV 927

  Fly   141 LNSLKLTKTRQTK-----CSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSSSFDTIQLLR 200
            |.:::|...:.:.     .|.||..|:|||:||:||:.||:::||||||||||:.::...::.::
plant   928 LETVELEDIKDSMVGLPGISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVK 992

  Fly   201 GLANEGRTIVCTIHQPSTNIYNLFN-LVYVLSAGRCTYQGT----PQNTVMFLSSV-GL-----E 254
            .:|..|||:||||||||.:|:..|: |:.:...|:..|.|.    ....:.:..|: |:     .
plant   993 NVAETGRTVVCTIHQPSIDIFETFDELILMKDGGQLVYYGPLGKHSSKVIKYFESIPGVPKVQKN 1057

  Fly   255 CPPYHNPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAPSETQVAKFNESQSPG 319
            |    |||.::|                   ||..:..:..:..:.|.|..::.:.|.|      
plant  1058 C----NPATWML-------------------DITCKSAEHRLGMDFAQAYKDSTLYKEN------ 1093

  Fly   320 QVQVQVQKIEIQNMESSKDLTKHTYPPTEYMRLWLLIGRCHLQFFRDWTLTYLKLGIHVLCSILI 384
              ::.|:::...::.|........|..|.:.:|...:.:.|..::|:.:....::...:|.|:|.
plant  1094 --KMVVEQLSSASLGSEALSFPSRYSQTGWGQLKACLWKQHCSYWRNPSHNLTRIVFILLNSLLC 1156

  Fly   385 GLFFGDSGSNATKQ------ISNVGMIMI-----HCVYLWYTTIMPGILRYPAEIEIIRKETFNN 438
            .|.|.....:...|      ..::..|:|     :|     .|:|..|   ..|..:..:|.|..
plant  1157 SLLFWQKAKDINNQQDLFSIFGSMYTIVIFSGINNC-----ATVMNFI---ATERNVFYRERFAR 1213

  Fly   439 WYKLRTYYLATIITSTPVHIIFS-----TVYITIGYLMTDQPVEMDRFVKYLLSAVVVTICADGL 498
            .|....|..:.::...|..::.|     .||..|||.|:...:....: ....|.::...|.   
plant  1214 MYSSWAYSFSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLY-SIFCSLLIFNYCG--- 1274

  Fly   499 GVFLGTVLNP-------VNGTFVGAVSTSCMLMFSGFLILLNHIPAAMRFMAYISPLRYALENMV 556
              .|...|.|       :..||...|:     :|:||::....||....:|.|:||..:.||.::
plant  1275 --MLMVALTPNIHMALTLRSTFFSMVN-----LFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLL 1332

  Fly   557 ISLYGNQRGQLICPPTEFYCHFKNAVTVLRQFG--------MEDGDFGHN--------ILMILIQ 605
            .|.||:               .:..:||   ||        :|| .||:.        .::|...
plant  1333 SSQYGD---------------VEKEITV---FGEKKSVSAFLED-YFGYKHDSLAVVAFVLIAFP 1378

  Fly   606 IAIFKVLSYFTLK 618
            |.:..:.::|..|
plant  1379 IIVASLFAFFMSK 1391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 165/663 (25%)
ABCG_EPDR 26..239 CDD:213180 84/228 (37%)
ABC2_membrane 355..558 CDD:279410 46/225 (20%)
ABCG41NP_001329357.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324553at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.