DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31689 and ABCG18

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_191071.1 Gene:ABCG18 / 824677 AraportID:AT3G55110 Length:708 Species:Arabidopsis thaliana


Alignment Length:576 Identity:149/576 - (25%)
Similarity:266/576 - (46%) Gaps:59/576 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SSPFNIIFEDLYYRVEVGK----DREK----KSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNIL 75
            |.||.:.|.:|.|.|.:.:    .|.|    |::|..|.|..:.||:.|::|.||||||:|::.|
plant    58 SVPFLLSFNNLSYNVVLRRRFDFSRRKTASVKTLLDDITGEARDGEILAVLGGSGAGKSTLIDAL 122

  Fly    76 TG-LTKSGVSGKIEIGKARKL--------CGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLK 131
            .| :.:..:.|.:.:...:.|        ..|:||||..||..||:||::.|:..::.......|
plant   123 AGRVAEDSLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSK 187

  Fly   132 EKRTLIDYLLNSLKLTKTRQTKCSN-----LSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSS 191
             |...::.|::.|.|.....|...:     :|||:::|:||.:::|.:|.:|||||||:||||::
plant   188 -KMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTN 251

  Fly   192 SFDTIQLLRGLANEGRTIVCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECP 256
            :|..:|:|:.:|..|..::.:|||||..|..|.:.:.:||.|:..:.|:|.:...|.||.|...|
plant   252 AFMVVQVLKRIAQSGSVVIMSIHQPSARIIGLLDRLIILSHGKSVFNGSPVSLPSFFSSFGRPIP 316

  Fly   257 PYHNPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAPSETQVA---KFNESQSP 318
            ...|..:|.|:...     :.|..:|..:|: ..::::..|.:.|.|.::::|:   ....|.|.
plant   317 EKENITEFALDVIR-----ELEGSSEGTRDL-VEFNEKWQQNQTARATTQSRVSLKEAIAASVSR 375

  Fly   319 GQVQVQVQKIEIQNMESSKDLTKHTYPPTEYMRLWLLIGRCHLQFFRDWTLTYLKLGIHVLCSIL 383
            |::   |......|..|.:.::.:..||  ....::|..|    :.::|..|...:|:.:...::
plant   376 GKL---VSGSSGANPISMETVSSYANPP--LAETFILAKR----YIKNWIRTPELIGMRIGTVMV 431

  Fly   384 IGLFFG---------DSGSNATKQISNVGM-IMIHCVYLWYTTIMPGILRYPAEIEIIRKETFNN 438
            .||...         ..|:.........|| .|.:|       ....|..:..|..|..:||.:|
plant   432 TGLLLATVYWRLDNTPRGAQERMGFFAFGMSTMFYC-------CADNIPVFIQERYIFLRETTHN 489

  Fly   439 WYKLRTYYLATIITSTPVHIIFSTVYITIGYLMTDQPVEMDRFVKYLLSAVVVTICADGLGVFL- 502
            .|:..:|.::..:.|.|..:..|..:....:........::.|..|.|...........:..|: 
plant   490 AYRTSSYVISHALVSLPQLLALSIAFAATTFWTVGLSGGLESFFYYCLIIYAAFWSGSSIVTFIS 554

  Fly   503 GTVLNPVNGTFVGAVSTSCMLMFSGFLILLNHIPAAMRFMAYISPLRYALENMVIS 558
            |.:.|.:....|.....|..|:..||.|..:.||....:..|||.|:|..|.::|:
plant   555 GLIPNVMMSYMVTIAYLSYCLLLGGFYINRDRIPLYWIWFHYISLLKYPYEAVLIN 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 149/576 (26%)
ABCG_EPDR 26..239 CDD:213180 77/234 (33%)
ABC2_membrane 355..558 CDD:279410 43/213 (20%)
ABCG18NP_191071.1 3a01204 57..707 CDD:273361 149/576 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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