DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31689 and ABCG38

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001319673.1 Gene:ABCG38 / 822863 AraportID:AT3G30842 Length:1418 Species:Arabidopsis thaliana


Alignment Length:672 Identity:175/672 - (26%)
Similarity:303/672 - (45%) Gaps:129/672 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RTMPDFATSSPFN---IIFEDLYYRVEVGKDREKKSV-------LKGIKGTFKSGELTAIMGPSG 65
            ||..|.....||.   :.||::.|.|:..|:.::|.:       |.|:.|.|:.|.|||:||.||
plant   805 RTCNDKKLRIPFKPLYMTFENITYSVDTPKEMKEKGIRENKLVLLNGLSGAFRPGVLTALMGVSG 869

  Fly    66 AGKSSLMNILTGLTKSG-VSGKIEI-GKARK------LCGYIMQDDHFFPYFTVEETMLMAATLK 122
            |||::||::|.|...:| :.|:|.: |..:|      :.||..|.|...|..||.|::|.:|.|:
plant   870 AGKTTLMDVLAGRKNTGYIQGEIYVSGFPKKQDSFARVSGYCEQSDIHSPLLTVYESLLYSAWLR 934

  Fly   123 ISNQCVSLKEKRTLIDYLLNSLKLTKTRQ-----TKCSNLSGGQKKRLSIALELIDNPAVLFLDE 182
            :... :....:...|:.::..::|...|:     ...|.||..|:||::||:||:.||::||:||
plant   935 LPPD-IDTHTRELFIEEVMELIELKALREMLVGYVGISGLSTEQRKRMTIAVELVANPSILFMDE 998

  Fly   183 PTTGLDSSSSFDTIQLLRGLANEGRTIVCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMF 247
            ||:|||:.::...::.:|...:.|||:||||||||.:|:..|:.:::|:.|         ...::
plant   999 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLLTRG---------GEEIY 1054

  Fly   248 LSSVGLECPPYHNPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAPSETQVAKF 312
            :..:|      |:.:. |:|...|..|  ...:.|......|..:......||....:..||.|.
plant  1055 VGPIG------HHSSQ-LIEYFEGIRG--VGKIKEGYNPATWALEVTTRAQEDVLGVTFAQVYKK 1110

  Fly   313 NESQSPGQVQVQVQKIEIQNM-ESSKDLTK--HTYPP--------TEYMRLWL-----LIGRCHL 361
            :                  |: ..:|||.|  :..||        |:|.:.:|     .:.:.|.
plant  1111 S------------------NLYRRNKDLIKELNNIPPHAQDIHFSTKYSQSYLSQFQACLWKQHK 1157

  Fly   362 QFFRDWTLTYLKLGIHVLCSILIGLFFGDSGS-NATKQ--ISNVGMIMIHCVYL---WYTTIMPG 420
            .::|:.....::........|:.|:.|...|. ..|:|  .::||.:.....:|   ...|:.|.
plant  1158 SYWRNVPYNAVRFSFGAAVGIMYGIIFWSLGKRKGTRQDIFNSVGAMSTVVGFLSSQSAATVRPV 1222

  Fly   421 ILRYPAEIEIIRKETFNNWYKLRTYYLATIITSTPVHI----IFST-VYITIGYLMTDQPVEMDR 480
            ::   ||..:..:|.....|....|..:.:|...|..:    |:.. ||..|||..|.....::.
plant  1223 VI---AERTVFYREAGAGMYSALPYAFSQVIIEIPYTMAQACIYGVIVYGMIGYEWTASKFFLNI 1284

  Fly   481 FVKYLLSAVVVTICADGLGVF-------LGTVLNPVNGTFVGAVSTSCMLMFSGFLILLNHIPAA 538
            |..::  :::.:|.. |:.|.       :.::||       |.:||| ..:||||.|....:...
plant  1285 FFTFI--SILYSIYT-GIMVISVSPNQEIASILN-------GVISTS-WNVFSGFTIPRPRMHVW 1338

  Fly   539 MRFMAYISPLRYALENMVISLYGNQRGQLICPPT--EFYCHFKNAVTVLRQFGMEDGDFGHNILM 601
            :|:..|:.|..:.|..:.|:.||:...:|....|  ||   .||      .:|.|     :|.|.
plant  1339 LRWFTYVCPGWWGLYGLTIAQYGDVETRLDTGETVVEF---MKN------YYGYE-----YNFLW 1389

  Fly   602 I----LIQIAIFKVLSY-FTLK 618
            :    ||..::|.|..| |::|
plant  1390 VVSLTLIAFSMFFVFIYAFSVK 1411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 173/668 (26%)
ABCG_EPDR 26..239 CDD:213180 81/232 (35%)
ABC2_membrane 355..558 CDD:279410 46/220 (21%)
ABCG38NP_001319673.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D324553at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.