DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31689 and abcg2a

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_021325521.1 Gene:abcg2a / 735312 ZFINID:ZDB-GENE-050517-35 Length:644 Species:Danio rerio


Alignment Length:661 Identity:176/661 - (26%)
Similarity:314/661 - (47%) Gaps:105/661 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TSSP----FNIIFEDLYYRVEVG----KDRE-KKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMN 73
            :|||    ..:.|.::.|.:::.    |.:. ||::|.|:.|..|.| |.||:|.:|:||||.::
Zfish    23 SSSPSRRGATVSFHNINYSLKMKSGFCKSKSTKKNILIGLNGIMKPG-LNAILGATGSGKSSFLD 86

  Fly    74 ILTG-LTKSGVSGKIEIGKA------RKLCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLK 131
            :|.. ...:|:||::.|..|      :.|.||::|||......||.|.:..:|.|::. :.:..:
Zfish    87 VLAARKDPAGLSGEVLIDGAPQPPNFKCLSGYVVQDDVVMGTLTVRENLRFSAALRLP-KSIKQR 150

  Fly   132 EKRTLIDYLLNSLKLTKTRQTKCS-----NLSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSS 191
            ||...::.|:..|.|:|...::..     .:|||::||.:|.:|||.:|.||||||||||||:|:
Zfish   151 EKDEKVERLIQELGLSKVADSRVGTQLIRGVSGGERKRTNIGMELIIDPPVLFLDEPTTGLDAST 215

  Fly   192 SFDTIQLLRGLANEGRTIVCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECP 256
            :...:.||:.:.|.||||:.:||||..:||.||:.:.:|..|:..|.|..|:.:.:.|.:|..|.
Zfish   216 ANSVLMLLKKMGNNGRTIILSIHQPRYSIYRLFDSLTLLVGGKLVYHGPAQDALSYFSQIGYTCE 280

  Fly   257 PYHNPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGE---DADAPSETQVAKFNESQSP 318
            |::|||||.|:..|||         .:|..:...|::.:.|.:   ......:..|.::..|...
Zfish   281 PHNNPADFFLDVINGD---------SSAVTLNKLYEEVVDQDQLSSSLKGIEDRLVEEYQRSSIF 336

  Fly   319 GQVQVQVQKIEIQNME-----SSKDLTKHTYPPTEYMRLWLLIGRCHLQF-------FRDWTL-- 369
            .|....:|:| :|..:     .|:.:|..|             ..|| ||       ||:..|  
Zfish   337 QQTHADLQRI-VQGQDYSTRPKSRTITYST-------------SFCH-QFHWVLKRTFRNLMLNP 386

  Fly   370 --TYLKLGIHVLCSILIGLFFGDSGSNATKQISNVGMIMIHCVYLWYTTIMPGILRYPAEIEIIR 432
              :..::|:.:..::::|..|.....|::...:.:|.:........::::....| :.||.::..
Zfish   387 QTSVAQIGVMIFLALVVGAIFFGVAENSSGIQNRMGALFFITTNQCFSSVSAAEL-FIAERKLFV 450

  Fly   433 KETFNNWYKLRTYYLATIITS-----TPVHIIFSTV-YITIGYLMTDQPVEMDRF----VKYLLS 487
            .|..:.:|::..|:|:.|::.     |...:|||.| |..||.....:...:..|    |.|..:
Zfish   451 HEYISGYYRVSVYFLSKILSDILTLRTIPAVIFSCVAYFMIGLKPAAEAFFIFLFSIIMVSYTAT 515

  Fly   488 AVVVTICADGLGVFLGTVLNPVNGTFVGAVSTSCMLMFSGFLILLNHIPAAMRFMAYISPLRYAL 552
            |:.:.|.||...|.:..:...::..|        |::|||.|:.|..:...:.::.|.|..||.|
Zfish   516 AMTLAISADQTVVAIANIFMTISFVF--------MMIFSGLLVNLPSVATWLNWLKYFSIPRYGL 572

  Fly   553 ENMVISLY--------GNQRGQLICPPTEFYCHFKNAVTVLRQFGMEDGDFG--HNILMILIQIA 607
            ..:.|:.:        .|..|.:.....||          |::.|::...:|  .|.|.:.|...
Zfish   573 SALQINEFTGLFFCDNRNNSGSVCSSGEEF----------LQEQGIDYSAWGLWQNHLALGIMTF 627

  Fly   608 IFKVLSYFTLK 618
            ||..::|..|:
Zfish   628 IFLCIAYLKLR 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 176/661 (27%)
ABCG_EPDR 26..239 CDD:213180 83/229 (36%)
ABC2_membrane 355..558 CDD:279410 48/223 (22%)
abcg2aXP_021325521.1 PRK10535 43..638 CDD:333000 170/639 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574327
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.