DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31689 and Abca14

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_017167760.1 Gene:Abca14 / 67928 MGIID:2388708 Length:1719 Species:Mus musculus


Alignment Length:763 Identity:152/763 - (19%)
Similarity:255/763 - (33%) Gaps:261/763 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FATSSPFNIIFEDLYYRVEVGKDREKKSVLKGIKGTFK--------------------------- 53
            :....|:|...:..|:..|....||:..|...:...|.                           
Mouse   508 YGVPKPWNFFLQKAYWFGEPALSREESQVSDLLSSDFMEPEPVGLVAGIRIQHLYKEFILKNSTL 572

  Fly    54 -----------SGELTAIMGPSGAGKSSLMNILTGL---TK-----SGVSGKIEIGKARKLCGYI 99
                       .|::|.::|.:||||::.::|||||   |:     ||.....::.:.||..|..
Mouse   573 MAVNDLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTRGKVYISGYDISSDMVQIRKSLGLC 637

  Fly   100 MQDDHFFPYFTVEETMLMAATLKISNQCVSLKEKRTLIDYLLNSLKLTKTRQTKCSNLSGGQKKR 164
            .|||..||..||.|.:.....:|    .:.|:.:....:.:|.|..|.:...|...:||||.|::
Mouse   638 PQDDLLFPMLTVSEHLHFYCVIK----GIPLQNQSRETNRMLTSFGLLQQSNTMSKDLSGGMKRK 698

  Fly   165 LSIALELIDNPAVLFLDEPTTGLDSSSSFDTIQLLRGLANEGRTIVCTIHQ-------------- 215
            |||.:.||.:..|:.|||||:|:|..|...|..||:....: |||:.|.|.              
Mouse   699 LSIIIALIGDTKVVILDEPTSGMDPVSRRATWDLLQHYKKD-RTILLTTHHMDEADVLGDRIAIL 762

  Fly   216 -----------------------------PSTNIYNLFNLV--YVLSAGRCTYQGTPQNTVMFLS 249
                                         |.:|...:|.|:  |:.:|...|      |....||
Mouse   763 VMGILKCCGSSLFLKKLYGVGYHLVIVKTPDSNDEKIFQLIKNYIPTAKMET------NVAAELS 821

  Fly   250 SVGLECPPYHNPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAPSETQV----- 309
            .:   .|..|                 |...||...|:..:.::..:.|......:..:|     
Mouse   822 FI---LPKEH-----------------THRFAELFTDLEEKQEELGISGFGVSMTTMDEVFFKVS 866

  Fly   310 ----AKFNESQSP-GQVQVQVQKIEIQNMESSKDLTKHTYP----PTEYMRLWLLIGRCHLQFFR 365
                .|.|...:| ..:..|....:.|||...::..:..|.    .:.:...|.|    ::|.||
Mouse   867 NLEDLKLNTEIAPSASIVSQSSNEDNQNMNVPRNFERPGYSRRHLDSSFNAGWSL----YIQQFR 927

  Fly   366 D------------WTLTYLKLGIHVLCSILIGLF------------------------------F 388
            .            |.|..|:|      ..|:||.                              |
Mouse   928 AMFIKRVMFSWRYWKLLLLQL------LALLGLMYLLIKGISFSVPKEPARVMDLEQYGETIVPF 986

  Fly   389 GDSGSNATKQI--SNVGMIM------IH---------------CVYLWYTTIMPGILRYPAEIEI 430
            ..||.....||  .|:..::      ||               |:|       ..|:.:..:: .
Mouse   987 SVSGDPNLTQILTKNLETMLKAKKQKIHEVQGDMKNYLLTSKDCIY-------SCIVAFSLDV-T 1043

  Fly   431 IRKETFNNWYKLRTYYLATIITSTPVHIIFS-----TVYITIGYLMTDQPVEMDRFVKYLLSAV- 489
            ..::||..|:....|:.|.:..|...:||:.     ...||:......|.|..|:..:..:|.: 
Mouse  1044 TEEKTFIFWFNNEAYHAAPLSLSILDNIIYKYLSGPDATITVSNNPQPQRVTKDKSNERSISGIQ 1108

  Fly   490 VVTICADGLGVF-----LGTVLNPVNGT----FVGAVSTSCMLMF--SGFL--ILLNHIPAAMRF 541
            :|.....|:.:|     |.||...|:..    ||..|.|   |.|  |..|  ::::.:...:..
Mouse  1109 IVFNLLFGMSIFTSGFCLMTVTERVSKAKHIQFVSGVYT---LNFWLSALLWDLIIHFVACVLLL 1170

  Fly   542 MAYISPLRYALENMVISLYGNQRGQLICPPTEFYCHFKNAVTVLRQFG 589
            :.::    |...::::..|                ||.:.:.:|..||
Mouse  1171 VVFL----YTDVDILLEKY----------------HFLDTMFILMLFG 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 152/763 (20%)
ABCG_EPDR 26..239 CDD:213180 72/303 (24%)
ABC2_membrane 355..558 CDD:279410 52/286 (18%)
Abca14XP_017167760.1 rim_protein <128..1709 CDD:130324 152/763 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.