DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and Abca16

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_038957107.1 Gene:Abca16 / 293444 RGDID:1563534 Length:1680 Species:Rattus norvegicus


Alignment Length:743 Identity:151/743 - (20%)
Similarity:276/743 - (37%) Gaps:208/743 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KDREKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNILTG---LTK-----SGVSGKIEIGKAR 93
            |:.:.|..:..:......|::|.::|.:||||::.:::|||   .|:     :|.:....:.:.|
  Rat   523 KEFKTKPAINNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYINGYNISDNMAEIR 587

  Fly    94 KLCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLKEKRTLIDYLLNSLKLTKTRQTKCSNLS 158
            |..|:..|.|..|...|:.|.:.....:|...|.::..|    |:.:|:...|.:...|...::|
  Rat   588 KDLGFCPQHDLLFDDLTLSEHLFFYCMIKGHPQNINCVE----INRMLSVFNLQENYHTLSGSVS 648

  Fly   159 GGQKKRLSIALELIDNPAVLFLDEPTTGLDSSSSFDTIQLLRGLANEGRTIVCTIH-QPSTNIYN 222
            ||.:::|||.|.|:....|:.||||::|:|..|...|..:|:.. .:.|||:.|.| ....::  
  Rat   649 GGVRRKLSIILALMGGSKVVILDEPSSGMDPMSRRATWDILQHY-KQNRTILLTTHYMDEADV-- 710

  Fly   223 LFNLVYVLSAGRCTYQGTPQNTVMFLSS-------VGLECPPY------------HNPADFLLEC 268
            |.:.:.::..|.....|:.    :||..       :.||..||            |.|...|   
  Rat   711 LGDRIAIMVRGTLHCCGSS----VFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQQHVPGSML--- 768

  Fly   269 ANGDYGDQTEALAEAAKDIRWRYDQQLMQGE-----------DADAPSETQV-AKFNESQSPGQV 321
             ..|.|::...:  ..|....|::....:.|           .|...:..:| .|.|:..:|   
  Rat   769 -ENDIGNELSFI--LPKKYVSRFETLFTELEMRQKALGIANFGASITTMEEVFLKVNKLAAP--- 827

  Fly   322 QVQVQKI-------------EIQNMESSKDLTKHTYP--------------PTEYMRLWLLIGRC 359
            |..:|.|             |.||:...::..|..:|              |....:.:.:..:.
  Rat   828 QRSIQTIQPYYLTYKKMRQDEQQNVNILRNYNKPIFPYLREIATVKFNTGVPLYRQQFYSMFIKR 892

  Fly   360 HLQFFRDWTLTYLKLGIHVLCS--ILIGLFFGDSG--------SNATKQI--------SNVGMIM 406
            .|...|:|.|.:|::.:.::.:  :|:.|...|:.        |:..|.|        |::.:.:
  Rat   893 ALFIGRNWKLMFLQIIVVLVVTTYLLLSLHLDDNDIPERELNLSHYGKTIVPYSISGNSDLALNL 957

  Fly   407 IHCVYLWYTT-------IMPGILRYPAE-------------IEIIRKET-----FNNWYKLRTYY 446
            |..:.::..:       |...:..|..|             |::.|.:|     |||    ..|:
  Rat   958 IKNLKIFLKSKNQSLKKIKGDMNNYILENKDCRTFCIIALSIKVERNKTVLTIFFNN----EAYH 1018

  Fly   447 LATIITSTPVHIIFSTVY---ITIGYLMTDQPVEMDRFVKYLLSAV------VVTICADGLGVFL 502
            ...|..|...:|:|.|:.   .:|......||:.     .|..:.|      :|...|.|:.|.:
  Rat  1019 SPAISLSILDNILFMTLSGRDASITAFNKPQPLP-----HYGSNTVPVNGLQIVQCLAFGISVVV 1078

  Fly   503 G-----TVLNPVNGT----FVGAV--------STSCMLMF-----------------SGFLILLN 533
            |     ||...::..    |:..|        :..|.|:|                 ..|::..|
  Rat  1079 GSFSIQTVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFACCVLLGIFRFCQLEAFVVHYN 1143

  Fly   534 HIPAAMRFMAY---ISPLRYA---LEN------MVISLYGNQRGQLICPPTEFYCHFKNAVTVLR 586
            .:...:.||.|   :.||.|.   |.|      :.|:|:           ..|...|...:..:.
  Rat  1144 FLDTILIFMLYGWCVVPLTYLGSFLFNSSTAAYIKITLF-----------NYFSTMFSIIIYTIV 1197

  Fly   587 QFGMEDGDFGHNILMILIQIAIFKVLSY 614
            ||..||..   .::.|||:..:..:.||
  Rat  1198 QFYGEDFP---ALIHILIKTILMALPSY 1222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 151/743 (20%)
ABCG_EPDR 26..239 CDD:213180 54/210 (26%)
ABC2_membrane 355..558 CDD:279410 55/300 (18%)
Abca16XP_038957107.1 rim_protein <163..1664 CDD:130324 151/743 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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