DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and Abca17

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_001026807.1 Gene:Abca17 / 287112 RGDID:1560494 Length:1773 Species:Rattus norvegicus


Alignment Length:678 Identity:166/678 - (24%)
Similarity:272/678 - (40%) Gaps:161/678 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DFATSSP---FNII-FEDLYYRVEVGKDREKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNIL 75
            ||....|   .|.| .:.||.....|  |.|...:|.:......|::|.::|.:||||:::.::|
  Rat   512 DFLQDEPAGHINAIEIQHLYKVFYTG--RSKCIAVKDLSMNLYKGQITVLLGHNGAGKTTVCSVL 574

  Fly    76 TGLTKSG-----VSGKIEIGK----ARKLCGYIMQDDHFFPYFTVEETMLMAATLK-ISNQCVSL 130
            |||....     :.| .||.|    .||..|:..|.|..|..|||.:.:.....|| :|:|  ..
  Rat   575 TGLIPPSKGHAYIHG-CEISKDMVRIRKNVGWCPQHDILFDNFTVTDHLYFYGQLKGLSHQ--DC 636

  Fly   131 KEKRTLIDYLLNSLKLTKTRQTKCSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSSS--- 192
            .||   |:.:|::|.|...|.::...||||.|::|:|.:.||....||.|||||:|:||||.   
  Rat   637 HEK---IEEMLHTLGLEDKRNSRSKFLSGGMKRKLAIGIALIAGSKVLILDEPTSGMDSSSRRAI 698

  Fly   193 FDTIQLLRGLANEGRTIVCTIH-QPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLS---SVG- 252
            :|.:|..:|    .||::.|.| ....::  |.:.:.:|:.|.....|||.    ||.   ..| 
  Rat   699 WDLLQQQKG----DRTVLLTTHFMDEADL--LGDRIAILAKGELQCCGTPS----FLKQKYGAGY 753

  Fly   253 ----LECP----------PYHNPADFLLECANGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADA 303
                ::.|          .||:..:.:||...|:     |.:....|....|::......|... 
  Rat   754 YMTIIKTPLCDTEKLAKVIYHHIPNAILESRIGE-----EMIFTLPKKAMPRFEALFADLEQRQ- 812

  Fly   304 PSETQVAKFNES-QSPGQVQVQVQKIE-------IQNMESSKDLTKHTYPPTEYMRLWLLIGRC- 359
             :|..::.|..| .:..:|.::|.|:.       .:...|.:.|.::...|.:.:       :| 
  Rat   813 -TELGISTFGASVTTMEEVFIRVCKLADPSTNVLTEKRPSLRHLPRNHRVPVDRI-------KCL 869

  Fly   360 HLQFF---RDWTLTYLKLGIHVLCSILIGLFFGDSGSNATKQIS----NVGMIMIHCVYLWYTTI 417
            |.:.|   .|..:. |..|..:||.....:..        |:::    |           |...:
  Rat   870 HSRIFSLSSDQPIR-LNTGFSLLCQQFYAMLL--------KKVAFSRRN-----------WMLVL 914

  Fly   418 MPGILRYPAEIEIIRKETFNNWYKLRTYYLATIITSTPVHIIFSTVYITI-GYLMTD----QPVE 477
            ...|| .|..|.::....||  :|||.      :.:.|:.:...|...|| .:.:.:    .|..
  Rat   915 SVQIL-LPLVIIMLSLSFFN--FKLRK------LDNVPLELTLQTYGQTIVPFFIAENSRLDPQL 970

  Fly   478 MDRFVKYLLSAVVVTICADGLGVFLGTVLN---------PVNGTFVGAVSTSCMLMFSGFLILLN 533
            .|.|||.|::|..|.:...      |:|.|         |.:...:..|:.|       |..:.:
  Rat   971 SDNFVKMLVAAGQVPLRIQ------GSVENFLLKKAKEAPEDFDKLYVVAAS-------FEDVND 1022

  Fly   534 H--IPAAMRFMAYISP-LRYAL-ENMVISLYGNQRGQLICPPTEFYCHFKNAV----TVLRQFGM 590
            |  :.|.....||.|| |..|| :|::..|.......:   .|..|...:.|:    |:|.|   
  Rat  1023 HTTVKALFNNQAYHSPSLALALVDNVLFKLLSGANASI---TTTNYPQPQTAMELSETILYQ--- 1081

  Fly   591 EDGDFGHNILM-ILIQIAI----FKVLS 613
              |..||.::: .|..||.    |.:|:
  Rat  1082 --GPKGHYLVVNFLFGIAFLSSSFSILT 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 166/678 (24%)
ABCG_EPDR 26..239 CDD:213180 72/226 (32%)
ABC2_membrane 355..558 CDD:279410 49/228 (21%)
Abca17NP_001026807.1 ABC2_membrane_3 <262..464 CDD:289468
ABC_subfamily_A 525..746 CDD:213230 77/238 (32%)
drrA 543..834 CDD:130256 87/313 (28%)
ABC2_membrane_3 913..1255 CDD:289468 53/225 (24%)
CcmA 1369..1682 CDD:224054
ABC_subfamily_A 1369..1590 CDD:213230
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1690..1773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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