DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and Abca13

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_839990.2 Gene:Abca13 / 268379 MGIID:2388707 Length:5034 Species:Mus musculus


Alignment Length:482 Identity:110/482 - (22%)
Similarity:184/482 - (38%) Gaps:111/482 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VEVGKDRE-KKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNILTGL--------TKSGVSGKIE 88
            :.|.|:.| .|..::.:..||...::||::|.:||||::::::|.||        |.:|.:.:.:
Mouse  3813 ISVTKEYEDHKVAVQELTLTFHRDQITALLGTNGAGKTTIISMLMGLFPPTSGTITINGKNLQTD 3877

  Fly    89 IGKARKLCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLKEKRTLIDYLLNSLKLTKTRQTK 153
            :.|.|:..|...|.|......||.|.:::.|::|.  ...:.||.:..::..|:.::||:.:...
Mouse  3878 LSKVREELGVCPQQDVLLDNLTVREHLMLFASIKA--PWWTTKELQQQVNKTLDEVELTQHQHKP 3940

  Fly   154 CSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSSS---FDTIQLLRGLANEGRTIVCTIHQ 215
            ...||||.|::|||.:..:.....:.||||::|:|..|.   :|.:...|    |||||:.|.|.
Mouse  3941 AGVLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWDILLKYR----EGRTIIFTTHH 4001

  Fly   216 PSTNIYNLFNLVYVLSAG--RC---------TY-QG---------------TPQNTVMFLSSVGL 253
             ......|.:.|.||..|  ||         || ||               .|::.....|.:.:
Mouse  4002 -LDEAEMLSDHVAVLQQGRLRCYAPPADLKETYGQGLTLTLSKQPSILETQEPKDVARVTSLIQI 4065

  Fly   254 ECPPYHNPADFLLECANGD--YGDQTEALAEAAKDIRWRYDQQLMQ------GEDADAPSETQVA 310
                 :.|..||.:...|:  |....:|.....|.:....||.|..      |.......|..:.
Mouse  4066 -----YIPQAFLKDSCGGELTYTIPKDADRTCFKGLCQALDQNLQHLHLTGYGISDTTLEEVFLM 4125

  Fly   311 KFNESQSPGQVQVQVQKIEIQNMESSKDLTKHTYPPTEYMRLWLL---IGRCH------------ 360
            ...::.....:... .|:|.||......|:.|...|........|   ||.|.            
Mouse  4126 LLQDTNKKSYITPD-NKVEPQNERPVGPLSPHNVSPLSTPPEGALPEPIGGCQLLLGQAVALLRK 4189

  Fly   361 --LQFFRDWTLTYLKLGIHVL-CSILIGLFFGDSGSNATKQISNVGMIMIHCVYLWYTTIMPGIL 422
              |...|.|..|...|.:.|| .::.:|||.                            :.|..:
Mouse  4190 RLLHTLRAWKSTTSDLLLPVLFVALAMGLFM----------------------------VQPLAI 4226

  Fly   423 RYPAEIEIIRKETFNNWYKLRTYYLAT 449
            .||.     .|.|..::....||:.::
Mouse  4227 TYPP-----LKLTPGHYETAETYFFSS 4248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 110/482 (23%)
ABCG_EPDR 26..239 CDD:213180 66/229 (29%)
ABC2_membrane 355..558 CDD:279410 21/113 (19%)
Abca13NP_839990.2 rim_protein 3036..5019 CDD:130324 110/482 (23%)
ABC_subfamily_A 3815..4030 CDD:213230 64/221 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4135..4165 7/30 (23%)
ABC_subfamily_A 4692..4919 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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