DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and abt-2

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_490949.3 Gene:abt-2 / 171782 WormBaseID:WBGene00000020 Length:2146 Species:Caenorhabditis elegans


Alignment Length:658 Identity:147/658 - (22%)
Similarity:239/658 - (36%) Gaps:199/658 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GELTAIMGPSGAGKSSLMNILTGL-TKSGVSGKI-------EIGKARKLCGYIMQDDHFFPYFTV 111
            |::|.::|.:||||::.|:||.|| ..|..:.||       ::.:.|.:.|...|.:..|.:.||
 Worm   955 GQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDVLGICPQHNVLFSHLTV 1019

  Fly   112 EETMLMAATLKISNQCVSLKEKRTLIDYLLNSLKLTKTRQTKCSNLSGGQKKRLSIALELIDNPA 176
            .|.:.:.|.||    .|...|..:.:|.:|.|:.||:......|.||||.|:||.|.:..|....
 Worm  1020 SEQLRLFAALK----GVPDSELTSQVDEILASVSLTEKANKLASTLSGGMKRRLCIGIAFIGGSR 1080

  Fly   177 VLFLDEPTTGLDSSSSFDTIQLLRGLANEGRTI-VCTIHQPSTNIYN------------------ 222
            .:.|||||.|:|.::..|..:||: ...||||| :.|.|....::.:                  
 Worm  1081 FVILDEPTAGVDVTARKDIWKLLQ-RNKEGRTILLSTHHMDEADVLSDRIAILSQDFEKPDLLDG 1144

  Fly   223 ---LFNLVYVLSAGRCTYQGTPQNTVMF------------------------------LSSVGLE 254
               :|...|.|...|..|....:.|.:|                              :..:.||
 Worm  1145 KRLIFQHFYALLVCRINYTLKSKRTFLFQVIIPLFLLALAELFVLLQVSTARPDLMVSMPPLPLE 1209

  Fly   255 CPPYHNPADFLLE----CANGDYGDQTEAL-------AEAAKDI--------------RWRYDQQ 294
            .....|.:||.:.    ..|....|...|:       ...|||:              |.||.  
 Worm  1210 TSIMGNHSDFYVNSWDTAENSTANDILHAMFSSPGTGPRCAKDVPNDLLDTMRRELMFRNRYG-- 1272

  Fly   295 LMQGEDADAPSETQVAKFNESQSPGQVQVQVQKIEIQNMESSKDLTKHTYPPTEYMRL----WLL 355
              .|.:..||...:.:..||        .|.|.|: ...:.::|::..||....|...    |  
 Worm  1273 --FGRNKPAPGVDKDSVDNE--------YQCQNIQ-GEFDYTEDISNATYNAPIYCGCEDFGW-- 1324

  Fly   356 IGRCHLQFFRDW---TLTYLKLGIHVLCSILIGLFFGDSGSNATK--------QISNVGMIMIHC 409
              .|.|:   ||   ...:|:|.       .....|..:|.|.|:        |::|        
 Worm  1325 --NCTLE---DWKWNETNWLRLN-------TTDRIFDLTGRNLTQFRLITRFAQLAN-------- 1369

  Fly   410 VYLWYTTIMPGIL------------RYPAEIEIIRK---ETFNN-WYKLRTYYLAT--IITSTPV 456
                  |..|..|            :..|:|:..::   ||..: ...:|...|.|  |..:||.
 Worm  1370 ------TTAPFFLGGFSLGHVNQRAQSQADIDTSKRGWLETIKDIAQSMRIINLNTTGIEPATPK 1428

  Fly   457 HIIFSTVYITIGYLMTD--QPVEMDRFVKY---------------LLSAVVV-----TICADGLG 499
            .:......||:..::.|  |.:::...||.               :||..::     .|..:.||
 Worm  1429 VLDPFAQNITLNQVVNDLLQNLDVRENVKVWFNNKIWPGFPIASNILSNALLRQEDYAIDPEDLG 1493

  Fly   500 VFLGTVLNPVNGTFVGAVS------TSCMLMF--SGFLILLNHIPAAMRFMAYISPLRYALENMV 556
            :.  |:.:|:|.|....:.      |..:.:|  :..|::|:.|||.  |..|:...|.. |.:.
 Worm  1494 IL--TMNHPMNKTISQTLDQNALKFTQALAVFRITILLLVLSMIPAG--FTVYLVEDRIC-EALH 1553

  Fly   557 ISLYGNQR 564
            :.|.|..|
 Worm  1554 LQLVGGLR 1561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 147/658 (22%)
ABCG_EPDR 26..239 CDD:213180 64/213 (30%)
ABC2_membrane 355..558 CDD:279410 51/261 (20%)
abt-2NP_490949.3 rim_protein 39..2117 CDD:130324 147/658 (22%)
ABC_subfamily_A 929..1134 CDD:213230 59/183 (32%)
ABC_subfamily_A 1802..2024 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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