DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and Abca2

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_006497672.1 Gene:Abca2 / 11305 MGIID:99606 Length:2464 Species:Mus musculus


Alignment Length:401 Identity:98/401 - (24%)
Similarity:160/401 - (39%) Gaps:93/401 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RTMPDFATSSPFNIIFEDLYYRVEVGKDREKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNIL 75
            |.|.:..|..|..:..:.|   .:|.|: :||..|..:.......::.:.:|.:||||::.|:||
Mouse  1007 RGMEEEPTHLPLVVCVDKL---TKVYKN-DKKMALNKLSLNLYENQVVSFLGHNGAGKTTTMSIL 1067

  Fly    76 TGL--------TKSGVSGKIEIGKARKLCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLKE 132
            |||        |..|...:.|:.:.||..|...|.:..|...||||.:...:.||...|    :|
Mouse  1068 TGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQ----EE 1128

  Fly   133 KRTLIDYLLNSLKLTKTRQTKCSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLD---SSSSFD 194
            .|...|.::..|:|:..|.:....||||.|::||:|:..:.....:.|||||.|:|   ..:.:|
Mouse  1129 IRKETDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD 1193

  Fly   195 TIQLLRGLANEGRTI-VCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPY 258
            .|...:    .|||| :.|.|....::  |.:.:.::|.|:....|:|    :||          
Mouse  1194 LILKYK----PGRTILLSTHHMDEADL--LGDRIAIISHGKLKCCGSP----LFL---------- 1238

  Fly   259 HNPADFLLECANGDYGD----------------QTEALAEAAKDIRWRYDQQLMQGEDADAP--- 304
                       .|.|||                |...||.:                .:..|   
Mouse  1239 -----------KGAYGDGYRLTLVKQPAEPGTSQEPGLASS----------------PSGCPRLS 1276

  Fly   305 --SETQVAKFNESQSPGQVQVQVQKIEIQNMESSKDLTKHTYPPTEYMRLWLLIGRCHLQFF--R 365
              ||.||::|........:.|.....|:..:..|:.:.|..:... :.:|...:...||..|  .
Mouse  1277 SCSEPQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERL-FQQLEHSLDALHLSSFGLM 1340

  Fly   366 DWTL--TYLKL 374
            |.||  .:||:
Mouse  1341 DTTLEEVFLKV 1351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 96/397 (24%)
ABCG_EPDR 26..239 CDD:213180 64/224 (29%)
ABC2_membrane 355..558 CDD:279410 8/24 (33%)
Abca2XP_006497672.1 rim_protein 58..2398 CDD:130324 98/401 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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