DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31689 and abcg4

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:XP_004916110.1 Gene:abcg4 / 101734071 XenbaseID:XB-GENE-22063023 Length:639 Species:Xenopus tropicalis


Alignment Length:618 Identity:227/618 - (36%)
Similarity:348/618 - (56%) Gaps:47/618 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SPFNIIFEDLYYRVEVG---KDREKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNILTGLTKS 81
            |..:|.|:||.|.|..|   :.|..|::||.:.|.|.|.||..||||||||||:|||||.|..:|
 Frog    53 SAVDIEFKDLSYSVREGPCWRKRGYKTLLKCLSGMFCSRELIGIMGPSGAGKSTLMNILAGYRES 117

  Fly    82 GVSGKI-------EIGKARKLCGYIMQDDHFFPYFTVEETMLMAATLKISNQCVSLKEKRTLIDY 139
            |::|:|       |:...||:..||||||...|:.||:|.|:::..||::.:   ::.|:.|::.
 Frog   118 GMTGQILVNGKQRELRTFRKMSCYIMQDDMLLPHLTVKEAMMVSTNLKLNEK---MEVKKKLVNE 179

  Fly   140 LLNSLKLTKTRQTKCSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLDSSSSFDTIQLLRGLAN 204
            :|.:|.|.....|:...|||||:|||:|||||::||.|:|.||||:||||:|.|..:.||..||.
 Frog   180 ILTALGLLDCSGTRTLFLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLLNSLAQ 244

  Fly   205 EGRTIVCTIHQPSTNIYNLFNLVYVLSAGRCTYQGTPQNTVMFLSSVGLECPPYHNPADFLLECA 269
            .||||:|||||||..::.:||.:|:||.|:|.|:|:..:.:.:|..:||.||.|||||||::|.|
 Frog   245 GGRTIICTIHQPSAKLFEMFNKLYILSQGQCIYRGSVTHLIPYLKGLGLHCPTYHNPADFIIELA 309

  Fly   270 NGDYGDQTEALAEAAKDIRWRYDQQLMQGEDADAP---SETQVAKFNESQSPGQVQVQVQKIEIQ 331
            :|:|||....|..|.              ||...|   .::|..|.::...|..|.|.|:     
 Frog   310 SGEYGDLNPLLFRAV--------------EDGLCPITRDKSQQTKLDQEHCPNDVSVHVE----- 355

  Fly   332 NMESSKDLTKHTYPPTEYMRLWLLIGRCHLQFFRDWTLTYLKLGIHVLCSILIGLFFGDSGSNAT 396
                     .||:..:...:..:|..|..|...||..||:|:...|:...:||||.:...|.:|:
 Frog   356 ---------SHTFATSSLNQFCILFKRTFLSILRDTVLTHLRFMSHLCIGVLIGLLYLHIGDDAS 411

  Fly   397 KQISNVGMIMIHCVYLWYTTIMPGILRYPAEIEIIRKETFNNWYKLRTYYLATIITSTPVHIIFS 461
            |..:|.|.:....::|.:..:||.:|.:|.|:.:..:|..|.||.|:.||||..:...|..|:..
 Frog   412 KVFNNTGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIVCP 476

  Fly   462 TVYITIGYLMTDQPVEMDRFVKYLLSAVVVTICADGLGVFLGTVLNPVN-GTFVGAVSTSCMLMF 525
            ..|.:|.|.||.||.|:.||:.:...|....:.|..||:.:|...|.:. .||||.|:...:|:|
 Frog   477 VAYCSIVYWMTSQPPEVSRFLLFSALATSTALVAQSLGLLIGVASNSLQVATFVGPVTAIPVLLF 541

  Fly   526 SGFLILLNHIPAAMRFMAYISPLRYALENMVISLYGNQRGQLICPPTEFYCHFKNAVTVLRQFGM 590
            |||.:....||..:::.:|||.:||..|.:::::||..|..|.|  .|..|.|:....||::..:
 Frog   542 SGFFVSFKTIPTYLQWCSYISYVRYGFEGVILAIYGMDRAPLQC--RELPCTFQLPQQVLQELDV 604

  Fly   591 EDGDFGHNILMILIQIAIFKVLSYFTLKHKIKT 623
            ||.....:.|::.......::|:|..|::::|:
 Frog   605 EDAKLYVDFLVLGGFFLGLRLLAYLVLRYRVKS 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 226/615 (37%)
ABCG_EPDR 26..239 CDD:213180 107/222 (48%)
ABC2_membrane 355..558 CDD:279410 69/203 (34%)
abcg4XP_004916110.1 3a01204 40..639 CDD:273361 227/618 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177791at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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