DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tho2 and thoc2

DIOPT Version :9

Sequence 1:NP_608646.3 Gene:tho2 / 326153 FlyBaseID:FBgn0031390 Length:1642 Species:Drosophila melanogaster
Sequence 2:XP_004916928.1 Gene:thoc2 / 100145575 XenbaseID:XB-GENE-980539 Length:1590 Species:Xenopus tropicalis


Alignment Length:1689 Identity:688/1689 - (40%)
Similarity:974/1689 - (57%) Gaps:241/1689 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TLNP-EVFKHLDKSGRSEFLKYLKHQLQDAADTPVYDKNGVFKQGISNAIYQLLWQTLRFTHKKD 122
            ||.| :..|:.:|||:::||:..:...:...:...:.:       |...:|:...|.::...|:|
 Frog     4 TLLPADWIKNWEKSGKNDFLQLCRSLSEKGQELVTFTE-------IQQVLYEFACQVVKGNLKQD 61

  Fly   123 IVLHLLLEVVALHADFPSLIVDVVNILDSETSLITDGLQEE--RHAFVQLVKDLDRVIPESLLKE 185
            .|..:|.|::|...|.||::.||..|||.|||    .|:|:  |..|.|||.....:|.:::|||
 Frog    62 QVSGVLAEIIAFRDDMPSVLADVFCILDIETS----SLEEKWRRDHFTQLVSSCLYLISDTILKE 122

  Fly   186 RLEIDTLQEAGIVK-NKSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQEFDENTTPE 249
            ||:.|||:..|::| ::.|..|.:|:||||:|||::|||.|||:||:|||||||.|:...:.|.:
 Frog   123 RLDPDTLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDLSGSITSD 187

  Fly   250 SIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWNLFIPLLRSYM----PTGAIICEVLGYKFC 310
            .|::.|||||||||||||||||||:|.:|.||:..:.|.||:.|||    |  ..:|.:||:||.
 Frog   188 LILENIKSLIGCFNLDPNRVLDIILEVYECRPNHDDFFAPLIESYMCMCEP--QTLCHILGFKFK 250

  Fly   311 HFKD--SRTPRSLYHVCALLLKHGVIALNDVYVWLTPNDGSIKADWEEDLADAREMVRKLNL-IQ 372
            .:::  ..||.|||.|.|:||::.:|.|.|:||.|.|.:.:|..:.:.::.:|:::||||.: :.
 Frog   251 FYQEPSGETPSSLYRVAAVLLQNNLIELEDLYVHLLPAESTIIEEHKREVIEAKQIVRKLTMVVL 315

  Fly   373 TNKKEDEKDPPPPPSVKKFNEEKYNA---NQKFGLCEALLKVGDWENAYKIIQKLPEQAVVLQEP 434
            |:.|.:|||     ..|:.:|||...   |||.||.|:||::|||::|..|:.::|.......:|
 Frog   316 TSDKTEEKD-----KEKEKDEEKTEKPPDNQKLGLLESLLRIGDWQHAQSIMDQMPPYYAASHKP 375

  Fly   435 IARAIADLIHLSVENIYYKKCFKAPAGRRPSRNRLYEDSKLVAKMQAKEFGDLRKYTWPMANVLG 499
            ||.|:.||||.:::.:|.:.  ..|.|.:.||.......|  |...|:.|.|||:..:.|...||
 Frog   376 IAVALCDLIHKTIDPLYRRS--GVPKGAKGSRIVPLHSKK--APKPAETFEDLRRDAFTMLCYLG 436

  Fly   500 PAMHYDTVLMYKLIRIMRKLVVDMGVDSLNGPPPNSEAEQH----YYDIMSSLDACILPSLLYLD 560
            |.:.:|.:|:.|::|:.:.|:.::..::      |.|.::.    :..::|..|..:||:|..:|
 Frog   437 PHLSHDPILLAKIVRLGKALMKELQSEA------NIEEKEKMEILFSCLLSVTDQVLLPALTLMD 495

  Fly   561 NNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLIRRCGLAQRDIKALMKRVSKENVKQL 625
            .|..||||:|.:.|.|||.:||.||.:|||::|..||.|::.........|.:|||::|||:|..
 Frog   496 CNACMSEELWGMFKCFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENIKPS 560

  Fly   626 GRLVGKYSHCAPGLLFDYILLQIQIYDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLTGRLRFK 690
            ||.:||.||..|.:||||||.|||.|||||.||.|.|||||:|::|.|.|||||:|....:.:.|
 Frog   561 GRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKEKMK 625

  Fly   691 DDGTSLSLWLQSLASFCGTIYKKYSIELSGLLQYVANQLKSQKSLDLLILREIVHKMAGVESCEE 755
            .|.|::|.||||||||||.|::||.|||.|||||||||||:.||.|||||:|:|.||||:|..||
 Frog   626 HDDTTISSWLQSLASFCGAIFRKYPIELGGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEE 690

  Fly   756 MTNDQLQAMCGGEQLRGEAGYFSQVRNTKKSSNRLKEALANNDLAVAICLLMAQQKHCVIYRETA 820
            ||.:||:||.|||||:.|.|||.|:|||||||.|||:||...:||:.:|||||||::.|:::| .
 Frog   691 MTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLEYELALPLCLLMAQQRNGVVFQE-G 754

  Fly   821 AHSHLKLVGNLYDQCQDTLVQFGTFLGSTYSVDEYVERLPSIITMLREYHINTDVAFFLARPMFT 885
            ...||||||.|||||.|||||||.||.|..|.::|::|:|||..:..|:|...|.||||:|||:.
 Frog   755 GEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDFLCNEFHTPHDAAFFLSRPMYA 819

  Fly   886 HQINQKYDQLRKDDPNAKKLTTTQKLQKYLEATQLIMNPIVESVRPLHSSKVWEDISPQFLVTFW 950
            |.|:.|||:|:|.:...|:   ..|:.||:.:..|:|:|:.|:|..||..||||||||||..|||
 Frog   820 HHISSKYDELKKAEKGNKQ---QHKVHKYITSCDLVMSPVHEAVISLHPPKVWEDISPQFYATFW 881

  Fly   951 SLSMYDLHVPNESYQREVAKLKQLAQQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVD 1015
            ||:||||.||:.||.||:.|||...:...|..|...:|.|||:||..||.|||.:|.|||.|||.
 Frog   882 SLTMYDLAVPSNSYNREINKLKSQMRAIDENMDMPPNKKKKEKERCTALQEKLVEEEKKQSEHVA 946

  Fly  1016 KISQRLQEQKDSWFLLRSGKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVHTIHNLKTSNFS 1080
            ::.||::.:||:|.|.|   |.||:|||:|||||:||||.|:|:||:|||:||..:|..||.|||
 Frog   947 RVLQRMKLEKDNWLLAR---STKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHLQKTPNFS 1008

  Fly  1081 TLLCYDRIFCDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVS 1145
            |||||||:|.||.|:|.||||.||:|||||||.|||||.:||.|:||::|:|.:||||||..|.:
 Frog  1009 TLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTKWHGDRAVYDKDCGSYPGFVTILRAA 1073

  Fly  1146 NQFSEAN--DHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPHYPVLSKLA 1208
            : |...|  |.:.|||:|||.||||||:|||.|.||::.::..|||.||:|.:|||.||.:..|.
 Frog  1074 S-FDSGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLG 1137

  Fly  1209 QIIERKVDKVREEEKTKRPDLYAIASSYIGQLKLKTPHMLKESVFHQ------------------ 1255
            |.:||:|.|:.::||.|||||||:|..|.||||.:...|:.|:.||.                  
 Frog  1138 QALERRVHKICQDEKEKRPDLYALAMGYSGQLKSRKHFMVPENDFHHKDPPVRSSVPPPVQNGPG 1202

  Fly  1256 ------------------IAERPNKESPTSVGAPAAATRSDKLSP--TSPSGNTQG--------- 1291
                              ..|...|....|..|....|::...:|  |:.:||:..         
 Frog  1203 ISNQSASMLANAAKPEEGTTEETEKIKEKSQSALKVVTKAASTAPKVTASNGNSASSSKVLKEKE 1267

  Fly  1292 -----------------------TRAPGGAAPFYNSEQKSV-------IKEPDAKA----ASTTR 1322
                                   |:|||..|.....|.:|.       .||...||    ....:
 Frog  1268 DKDKTGKEKEKDKREKTPVAPLETKAPGKEAKEKAKEDRSSKDEKLRDAKEKTPKADKEKEKAKK 1332

  Fly  1323 ESKSQRGEGNNVTLVSTATSTASNNERESK-QRDLPAPRESQSRSKDDQQEQANNGSNGSRQSES 1386
            |.|||:.:.:...|:|..:...|..|||.: .|:..|.:|.:|:......::|  ..:||.:|..
 Frog  1333 EEKSQKEDKSKAVLMSNESKVPSEKEREKELSREKEALKEVKSKENSKSGDKA--AVSGSLKSPV 1395

  Fly  1387 RNRDV-ERDRHDQQDQRSISSHRSSRDIVRVKE-----------------------RTEAELHQ- 1426
            ...|: |.:|  :|.:|.|.:|.|......||:                       ..|.|:.: 
 Frog  1396 PRTDMTETER--EQKRRKIDTHSSPSHSSAVKDNLSEFKDSSAKHYTNHTTPAISKNKEKEVEKK 1458

  Fly  1427 ---RSRERSQRLEELEAQQRKREKTSRRGGEERIRHGDGVETVDLVGSTDNRHYEEFEGRMRDLS 1488
               :|||||:..|:.|.::||..|                                     ||  
 Frog  1459 ELDKSRERSREREKKEEKERKERK-------------------------------------RD-- 1484

  Fly  1489 SVSNESNGSLHHRQRSHETIEFEKVDSKRRKLESSTSSS---KKVEELVDSVKKARALKTKERNK 1550
                .|||       ..|.::    :|||||.|:.||.|   .|.|...||.:.:.    |||||
 Frog  1485 ----HSNG-------DRELLQ----ESKRRKEENGTSGSSKHSKSESPSDSPRSSE----KERNK 1530

  Fly  1551 DKLSDEER-DARKDRKL-----GRKRDRVDESNSNEHKRRREGQNGEEELRDRERHREKSPRER 1608
            .|.|.:|: |..|..|:     |.|::...:...:|.|.:||...|:||    ::|.:.|.:.|
 Frog  1531 SKSSSKEKGDFMKSEKMEKSSSGSKKESRHDKEKSEKKEKRESTGGKEE----KKHHKSSDKHR 1590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tho2NP_608646.3 THOC2_N 133..627 CDD:292752 204/510 (40%)
Thoc2 629..703 CDD:288568 43/73 (59%)
Tho2 939..1240 CDD:288156 176/302 (58%)
PRP38_assoc 1570..1639 CDD:289628 10/39 (26%)
thoc2XP_004916928.1 THOC2_N 11..562 CDD:374385 218/578 (38%)
Thoc2 564..638 CDD:371698 43/73 (59%)
Tho2 870..1169 CDD:371438 176/302 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 377 1.000 Domainoid score I854
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69669
Inparanoid 1 1.050 1164 1.000 Inparanoid score I203
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D979205at2759
OrthoFinder 1 1.000 - - FOG0003449
OrthoInspector 1 1.000 - - oto103299
Panther 1 1.100 - - LDO PTHR21597
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2346
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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