DRSC/TRiP Functional Genomics Resources

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Protein Alignment erm and CG4374

DIOPT Version :9

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001262874.1 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster


Alignment Length:348 Identity:74/348 - (21%)
Similarity:118/348 - (33%) Gaps:103/348 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ASEQNPAQQSQQQDEQSAKRACPLKFSIAKIMEPDHRPSQVPPPQPAPVSFATNDDDEDEDPEID 97
            :|:|...||.|||...:..         |.|:..|...|         :..|.:||.|       
  Fly   451 SSQQQQQQQQQQQQAHNGN---------ANILVDDMFLS---------LENAFSDDFE------- 490

  Fly    98 ADSERSCSPIEVISLDQSPSTVNYDSAFKKYVPGPCSGATSSVASP----PSTAAVQQFVSSRHQ 158
             ..:|..:.::..                      ||..:|...:|    ||:..:.|       
  Fly   491 -KIKRIANEVQQF----------------------CSAGSSGTPTPGDYVPSSDVLMQ------- 525

  Fly   159 ELLSQYPLLYYAPNQLMCAAAAAQYAALTAQQQSLASAAHLSSFTASLNASLHHSQSLRRNLGHP 223
              :|..|                   |:|:..|                  |...|.|:..:...
  Fly   526 --ISPSP-------------------AVTSAGQ------------------LQPPQPLKPEVSTS 551

  Fly   224 LAAAAAVAAVAQSQAVPNLQHTLEKSPVAQRTAQSSGLQANLKRKRSPQDQGEVTPPPASTATSA 288
            .:..:||.|.|.|..|.: ...:.|...|.:.:.|:....|:...........:.....|.::|:
  Fly   552 TSPTSAVVASAASNHVRS-GGGVVKPKKAYKRSSSNNNNPNVANNNQSSGGNPLIAGSGSGSSSS 615

  Fly   289 TGARSRS----PSPQGSIEDSSPGSASGGKPKTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCK 349
            :|:.|.|    |:..|....||.||....:.....|..|.|.|...|::..|:..|||.:||.|.
  Fly   616 SGSASSSSNSPPANSGGSSSSSSGSTQRKERSLHYCSICAKGFKDKYSVNVHIRTHTGEKPFACS 680

  Fly   350 VCGKGFRQASTLCRHKIIHTSEK 372
            :|||.|||.:.|.:|...|.::|
  Fly   681 LCGKSFRQKAHLAKHYQTHMTQK 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 29/82 (35%)
C2H2 Zn finger 320..340 CDD:275368 6/19 (32%)
zf-H2C2_2 332..357 CDD:290200 11/24 (46%)
zf-C2H2 346..368 CDD:278523 10/21 (48%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
zf-H2C2_2 363..385 CDD:290200 3/10 (30%)
C2H2 Zn finger 376..396 CDD:275368
zf-H2C2_2 389..413 CDD:290200
C2H2 Zn finger 404..424 CDD:275368
zf-H2C2_2 416..441 CDD:290200
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..478 CDD:275368
CG4374NP_001262874.1 zf-C2H2 649..671 CDD:278523 6/21 (29%)
C2H2 Zn finger 651..671 CDD:275370 6/19 (32%)
zf-H2C2_2 663..688 CDD:290200 11/24 (46%)
C2H2 Zn finger 679..699 CDD:275370 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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