DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment erm and ZK686.5

DIOPT Version :9

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001023030.2 Gene:ZK686.5 / 3565160 WormBaseID:WBGene00022795 Length:263 Species:Caenorhabditis elegans


Alignment Length:87 Identity:26/87 - (29%)
Similarity:46/87 - (52%) Gaps:9/87 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 CKVCGKGFRQASTLCRHK-IIHTSEKPH-KCQTCGKAFNRSSTLNTHSRIHAG--YKPFV-CEYC 407
            |::|.:.|..:..|..|: .:|.:  |: :|..|.|.|:::...|.|.:.|.|  .|.:| ||.|
 Worm   173 CELCEQNFSSSKMLLLHRGKVHNT--PYIECHLCMKLFSQTIQFNRHMKTHYGPNAKIYVQCELC 235

  Fly   408 GKGFHQKGNYKNH-KLTH-SGE 427
            .:.|..|.:.:.| .::| ||:
 Worm   236 DRQFKDKQSLRTHWDVSHGSGD 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 26/87 (30%)
C2H2 Zn finger 320..340 CDD:275368
zf-H2C2_2 332..357 CDD:290200 3/8 (38%)
zf-C2H2 346..368 CDD:278523 5/20 (25%)
C2H2 Zn finger 348..368 CDD:275368 5/20 (25%)
zf-H2C2_2 363..385 CDD:290200 7/23 (30%)
C2H2 Zn finger 376..396 CDD:275368 6/19 (32%)
zf-H2C2_2 389..413 CDD:290200 10/26 (38%)
C2H2 Zn finger 404..424 CDD:275368 6/20 (30%)
zf-H2C2_2 416..441 CDD:290200 4/14 (29%)
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..478 CDD:275368
ZK686.5NP_001023030.2 C2H2 Zn finger 173..194 CDD:275368 5/20 (25%)
C2H2 Zn finger 201..221 CDD:275368 6/19 (32%)
zf-C2H2_8 <204..251 CDD:292531 15/46 (33%)
C2H2 Zn finger 232..248 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.