DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment erm and CG10348

DIOPT Version :9

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster


Alignment Length:649 Identity:143/649 - (22%)
Similarity:227/649 - (34%) Gaps:188/649 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 EPDHRP-SQVPPPQ-----PA----PVSFATN-DDDEDEDPEIDADSERSCSPIEVISL------ 112
            |.||.| ..:|.|:     ||    |.|:.:: ..|......:.|.|..|.||....:.      
  Fly     3 EKDHSPRKMLPSPKQGCVYPALGLIPTSYISHVPYDLASSASVAATSSSSTSPTTTSATTTGRLQ 67

  Fly   113 ----DQSPSTVNYDSAFKKYVPGPCSGATSSVASPPSTAAVQQFVSSRHQELLSQYPLLYYAPNQ 173
                .|...|:|:.:..|:         .||...|...    :....|..:|:.|.|:.....|.
  Fly    68 HQHSHQQHQTLNHHAKGKR---------RSSFDQPLDL----RLAHKRKTDLVDQGPMEDENSNL 119

  Fly   174 LMCAAAAAQYAALTAQQQSLASAAHLSSFTASLNASLHHSQSLRRNL------------------ 220
            :|.|:.    .|:..|::...:..|:::..|.|...:  |:.:.|.|                  
  Fly   120 IMFASE----LAVAQQKEKELNNNHIAASLADLGFDM--SRKMLRALREGGAGGGGGGGGGGGGG 178

  Fly   221 GHPLAAAAAVAAVAQSQAV-PNLQHTLEKS-PVAQR--------------TAQSSGLQANLKRKR 269
            |.|..|...........|| |.|...:.|: |:..|              .|.||...|:.. .|
  Fly   179 GGPPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFP-FR 242

  Fly   270 SPQDQGEVT-PPPASTATSATGARSRSPSPQGS-------IED-------SSPGSASGGKPKTFS 319
            .|..:.|:| |||    |.........|:|:.|       ::|       .:..:|:||      
  Fly   243 HPLKKCELTWPPP----TEQLQLELPHPNPKLSPVLPHPQLQDYQTRRKNKARTAATGG------ 297

  Fly   320 CLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQTCGKAFN 384
                        |.|.::|.....| :.||.|||.|.:::.|.||...||.|:|:||:.|.::|:
  Fly   298 ------------NATPNLPQRNKDR-YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFS 349

  Fly   385 RSSTLNTHSR-IHAGYKPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYKCNICNKAFHQVYNLTFH 448
            .||.|..|.| ||...:||.||.|.:.|.|:.|...|...|..:..        :...:..::..
  Fly   350 ISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAV--------SLSALSGVSER 406

  Fly   449 MHTHNDKKPYTCRVCAKGFCRNFDLKKHMRKLHEIGGDLDDLDMPPTYDRRREYTRREPLASGYG 513
            ||            |.:.||.|...:.:..::....|.:       |..::::..:::   ....
  Fly   407 MH------------CIRRFCENPTEESYFEEIRSFMGKV-------TQQQQQQQQQQQ---HDQQ 449

  Fly   514 QASGQLTPDSSSGSMSPPINVTTPPLSSGETSNPAWPRSAVSQYPPGGFHHQLGVAPPHDYPSGS 578
            |...|.|..|:|.|.|          ||.:|              |...|.:...||.......:
  Fly   450 QQQHQSTATSASSSCS----------SSRDT--------------PTSSHEEADHAPATSTADTA 490

  Fly   579 AFLQLQPQQPHPQSQQHHQQQQRLSETFIAKVFXQRYYAESLNSSTGSTSTTSSTVTT-TTTAI 641
            |     |.....|.::..|....|..|..:|:|              .|:|..|.:|| .||:|
  Fly   491 A-----PSSSRDQEEEDSQPIMELKRTLTSKLF--------------PTTTADSAMTTPQTTSI 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 47/180 (26%)
C2H2 Zn finger 320..340 CDD:275368 3/19 (16%)
zf-H2C2_2 332..357 CDD:290200 10/24 (42%)
zf-C2H2 346..368 CDD:278523 9/21 (43%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
zf-H2C2_2 363..385 CDD:290200 10/21 (48%)
C2H2 Zn finger 376..396 CDD:275368 8/20 (40%)
zf-H2C2_2 389..413 CDD:290200 11/24 (46%)
C2H2 Zn finger 404..424 CDD:275368 7/19 (37%)
zf-H2C2_2 416..441 CDD:290200 3/24 (13%)
C2H2 Zn finger 432..452 CDD:275368 2/19 (11%)
C2H2 Zn finger 460..478 CDD:275368 4/17 (24%)
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/63 (41%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 10/23 (43%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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