DRSC/TRiP Functional Genomics Resources

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Protein Alignment erm and Osr2

DIOPT Version :9

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:XP_017450351.1 Gene:Osr2 / 315039 RGDID:1305812 Length:312 Species:Rattus norvegicus


Alignment Length:315 Identity:95/315 - (30%)
Similarity:125/315 - (39%) Gaps:73/315 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 SFTASLN---ASLHHSQSLRRNLGHPLAAAAAVAAVAQSQAVPNLQHTLEKSPVAQRTAQSSGLQ 262
            ||..::|   |::.|.|.|     :.|:|...:.....:...||: |.:.:|.:.:..|....:.
  Rat    22 SFLQAVNTFPAAVDHLQGL-----YGLSAVQTMHMNHWTLGYPNV-HEITRSTITEMAAAQGLVD 80

  Fly   263 ANLKRKRSP-------QDQG---EVTP------PPASTATSATGARSRSPSPQGSIEDSSPGSAS 311
            |.......|       ..||   .|.|      |....|..|..|....|...|.:...|||..|
  Rat    81 ARFPFPALPFATHLFHPKQGAIAHVLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLSPGLGS 145

  Fly   312 ----------------GGKP----KTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFR 356
                            |..|    |.|.|..||:.|...|||..|...||..||:.|.:|.|.||
  Rat   146 PISGLSKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR 210

  Fly   357 QASTLCRHKIIHTSEKPHKCQTCGKAFNRSSTLNTHSRIHAGYKPFVCEYCGKGFHQKGNYKNHK 421
            :...|..|:.||:.|||.|||.|||.|.:|.||..|..:|....|..|..||:.|:|:.|.|.|.
  Rat   211 RQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHL 275

  Fly   422 LTHSGEKAYKCNICNKAFHQVYNLTFHMHTHNDKKPYTCRVCAKGFCRNFDLKKH 476
            |||:                            |.|||:|..|.|.|.||.||::|
  Rat   276 LTHT----------------------------DIKPYSCEQCGKVFRRNCDLRRH 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 62/185 (34%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
zf-H2C2_2 332..357 CDD:290200 11/24 (46%)
zf-C2H2 346..368 CDD:278523 7/21 (33%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
zf-H2C2_2 363..385 CDD:290200 13/21 (62%)
C2H2 Zn finger 376..396 CDD:275368 10/19 (53%)
zf-H2C2_2 389..413 CDD:290200 8/23 (35%)
C2H2 Zn finger 404..424 CDD:275368 9/19 (47%)
zf-H2C2_2 416..441 CDD:290200 6/24 (25%)
C2H2 Zn finger 432..452 CDD:275368 0/19 (0%)
C2H2 Zn finger 460..478 CDD:275368 9/17 (53%)
Osr2XP_017450351.1 C2H2 Zn finger 174..194 CDD:275368 8/19 (42%)
zf-H2C2_2 186..211 CDD:404364 11/24 (46%)
C2H2 Zn finger 202..222 CDD:275368 7/19 (37%)
zf-H2C2_2 214..237 CDD:404364 13/22 (59%)
C2H2 Zn finger 230..250 CDD:275368 10/19 (53%)
COG5048 251..>312 CDD:227381 25/80 (31%)
C2H2 Zn finger 258..278 CDD:275368 9/19 (47%)
C2H2 Zn finger 286..306 CDD:275368 9/17 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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