DRSC/TRiP Functional Genomics Resources

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Protein Alignment erm and Zfp280b

DIOPT Version :10

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001406443.1 Gene:Zfp280b / 294343 RGDID:1565460 Length:532 Species:Rattus norvegicus


Alignment Length:491 Identity:111/491 - (22%)
Similarity:172/491 - (35%) Gaps:152/491 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 QPAPVSFATNDDDEDEDPEIDADSERSCSPIEVISLDQS-------------------------- 115
            ||    :..:||:.|.:|:     .||..||:|:..|.|                          
  Rat     3 QP----YVVDDDESDPEPQ-----PRSQEPIQVLDEDDSEDAELIFVGVENVKEDAELIFVGVTS 58

  Fly   116 ---PSTVNY------------------DSAFKKYVPGPCSGATS--SVASPPSTAAVQQFVSSRH 157
               |:..|.                  ::..::..|.|.:..||  ::..|.|.|..:...|...
  Rat    59 TSQPANSNILNRVTPGSRLKRKHDRLRETTTQRLQPSPPAAPTSEAAIVLPVSPAESRSTDSPII 123

  Fly   158 QELLSQYPLLYYAPNQLMCAAAAAQYAALTAQQQSLASAAHLSSFTASLNASLHHSQ---SLRRN 219
            .|.||:..  |.:.:|::.::::...:.|.....|.:..|..:.....||.||:.|:   |:   
  Rat   124 IEPLSESD--YKSNSQVVPSSSSKCCSPLATLSSSESGPARAACSGGGLNESLYVSKCHFSI--- 183

  Fly   220 LGHPLAAAAAVAAVAQ-SQAVP--NLQHTLEKSPVAQRTAQSSGLQA----NLKRKRSP------ 271
              :|.....::..|.: |.|:|  ...||   |...|||   ..|:|    ||....:|      
  Rat   184 --NPQRPERSIEIVEELSSALPPSGPFHT---SNAQQRT---PSLEAPKSLNLFVNGAPLSGDPV 240

  Fly   272 ---QDQGEVTPPPASTATSATGARSRSPSPQGS----IEDSSPGSASG-GKPK-----TF----- 318
               ||.|.|....:|.|:..|     ....:||    :.|...|...| |||:     ||     
  Rat   241 HPRQDSGSVDTDFSSLASPET-----FDPKKGSLTLLLSDFYYGQYKGEGKPEQKTHTTFKCPSC 300

  Fly   319 --------------------------------SCLECGKVFNAHYNLTRHMP-VHTGARP-FVCK 349
                                            :||.|.::|.:.:.|..|:. |||...| .|||
  Rat   301 SKALKNVKFMNHTKHHLELERQGSDEAWESHTTCLRCHRLFASPFQLECHIDRVHTAPDPCVVCK 365

  Fly   350 VCGKGFRQASTLCRH-KIIH-TSEKPHKCQTCGKAFNRSSTLNTH-SRIHAGYKPFVCEYCGKGF 411
            :|...|.....|..| |..| ..|.|:.||.|....:..:.:.|| ::.|...|..:|.:|.|.|
  Rat   366 ICELSFETEQVLLEHMKDNHKPGEMPYVCQVCKYRSSVFADVETHFTKCHVNTKNLLCPFCLKIF 430

  Fly   412 HQKGNYKNHKLTHSGEKAYKCNICNKAFHQVYNLTF 447
            .....|..|...|.....::|:.|...|     |||
  Rat   431 RTGMPYMCHCRGHWERNGHQCSKCRLQF-----LTF 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 51/205 (25%)
C2H2 Zn finger 320..340 CDD:275368 6/20 (30%)
C2H2 Zn finger 348..368 CDD:275368 7/20 (35%)
zf-H2C2_2 363..385 CDD:463886 8/23 (35%)
C2H2 Zn finger 376..396 CDD:275368 5/20 (25%)
C2H2 Zn finger 404..424 CDD:275368 6/19 (32%)
C2H2 Zn finger 432..452 CDD:275368 6/16 (38%)
C2H2 Zn finger 460..478 CDD:275368
Zfp280bNP_001406443.1 DUF4195 52..219 CDD:463993 35/179 (20%)
C2H2 Zn finger 334..355 CDD:275368 6/20 (30%)
C2H2 Zn finger 364..385 CDD:275368 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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