DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment erm and prz1

DIOPT Version :9

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_593073.1 Gene:prz1 / 2541806 PomBaseID:SPAC4G8.13c Length:681 Species:Schizosaccharomyces pombe


Alignment Length:493 Identity:119/493 - (24%)
Similarity:172/493 - (34%) Gaps:103/493 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PCSPAGEIAMMPPSKSPVMES----AASEQNPAQQSQQQDEQSAKRACPLKF----SIAKIMEPD 67
            |.|.|...:.:.||.||.:.:    :.|..||:....|....:...|....|    |.|...|.|
pombe   186 PVSRAIAASEISPSSSPQLLTSFLPSGSVSNPSSPYLQGSVGALYEADAFNFVDVMSQASGTEVD 250

  Fly    68 HR---------PS-----------------QVPPPQPAPVSFATN----------DDDEDE---D 93
            ..         ||                 .:.||....:...||          |.|.|.   :
pombe   251 SERFPSVDFEDPSLLMENQQNITGTGSFADYLQPPSSGSLGAFTNASPGESNTGIDFDTDNTNLN 315

  Fly    94 PEIDADSERSC-------SPIEVISLDQSP-------STVNYDSAFK---KYVPGPCS------G 135
            |.:|..|..|.       ||....|...||       .|:|.::|.:   :.|..|.|      .
pombe   316 PSVDLLSNHSTPSFIFENSPSAEFSHQSSPYLVPNSGRTLNSENARESTIRSVNSPFSEDHADAS 380

  Fly   136 ATSSVASPPSTAAVQQFVSSRHQELLSQYPLLYYAPNQLMCAAAAAQYAALTAQQQSLA-----S 195
            .|:.|..|.|..|:...|.:......|..|.:...|:....:.:.....|....|..::     |
pombe   381 LTTHVFDPISPTALSNSVLNYDSNNFSGTPQINVVPSSPSKSQSGPSLPANPLLQTDISITYSQS 445

  Fly   196 AAHLSSFTASLNASLHHSQSLRRNLGHPLAAAAAVAAVAQSQA---------VPNL----QHTLE 247
            |:.:|...| :|.:.:..|:  .||..|..:....|....:.|         :|.|    .|:.|
pombe   446 ASPVSGQPA-MNENSYDLQN--ANLCAPEMSPTYTARHRSNSAGSRFDAYEPIPQLYTHFSHSSE 507

  Fly   248 KSPVAQRTAQSSGLQANLKRKRSPQDQGEVTPPPASTATSATGARSRSPSPQGSIEDSSPGSASG 312
            ...|.|.| :..|...|...|.:.......|.|.:.:..|..|.:|.:.|   |.:..|...:.|
pombe   508 CLSVNQDT-ELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSS---SSKAKSESKSQG 568

  Fly   313 GKPKTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQ 377
            ....||:  .|.|.|...|||..||..||..|||.|.:|.|.|.:.....||:.:||..|...|.
pombe   569 NYVCTFA--GCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACV 631

  Fly   378 TCGKAFNRSSTLNTHSRIHAGYKPFVCEYCGKGFHQKG 415
            ||.:.|.|...||.|      ||..|.:.|.:...::|
pombe   632 TCNQRFARMDALNRH------YKSEVGQNCLRTATERG 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 41/121 (34%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
zf-H2C2_2 332..357 CDD:290200 13/24 (54%)
zf-C2H2 346..368 CDD:278523 7/21 (33%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
zf-H2C2_2 363..385 CDD:290200 9/21 (43%)
C2H2 Zn finger 376..396 CDD:275368 8/19 (42%)
zf-H2C2_2 389..413 CDD:290200 7/23 (30%)
C2H2 Zn finger 404..424 CDD:275368 2/12 (17%)
zf-H2C2_2 416..441 CDD:290200 119/493 (24%)
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..478 CDD:275368
prz1NP_593073.1 COG5048 121..620 CDD:227381 103/442 (23%)
zf-C2H2 570..594 CDD:278523 10/25 (40%)
C2H2 Zn finger 577..594 CDD:275368 8/16 (50%)
zf-H2C2_2 586..611 CDD:290200 13/24 (54%)
C2H2 Zn finger 602..622 CDD:275368 6/19 (32%)
zf-H2C2_2 616..639 CDD:290200 9/22 (41%)
C2H2 Zn finger 630..648 CDD:275368 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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