DRSC/TRiP Functional Genomics Resources

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Protein Alignment erm and prz1

DIOPT Version :10

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_593073.1 Gene:prz1 / 2541806 PomBaseID:SPAC4G8.13C Length:681 Species:Schizosaccharomyces pombe


Alignment Length:493 Identity:119/493 - (24%)
Similarity:172/493 - (34%) Gaps:103/493 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PCSPAGEIAMMPPSKSPVMES----AASEQNPAQQSQQQDEQSAKRACPLKF----SIAKIMEPD 67
            |.|.|...:.:.||.||.:.:    :.|..||:....|....:...|....|    |.|...|.|
pombe   186 PVSRAIAASEISPSSSPQLLTSFLPSGSVSNPSSPYLQGSVGALYEADAFNFVDVMSQASGTEVD 250

  Fly    68 HR---------PS-----------------QVPPPQPAPVSFATN----------DDDEDE---D 93
            ..         ||                 .:.||....:...||          |.|.|.   :
pombe   251 SERFPSVDFEDPSLLMENQQNITGTGSFADYLQPPSSGSLGAFTNASPGESNTGIDFDTDNTNLN 315

  Fly    94 PEIDADSERSC-------SPIEVISLDQSP-------STVNYDSAFK---KYVPGPCS------G 135
            |.:|..|..|.       ||....|...||       .|:|.::|.:   :.|..|.|      .
pombe   316 PSVDLLSNHSTPSFIFENSPSAEFSHQSSPYLVPNSGRTLNSENARESTIRSVNSPFSEDHADAS 380

  Fly   136 ATSSVASPPSTAAVQQFVSSRHQELLSQYPLLYYAPNQLMCAAAAAQYAALTAQQQSLA-----S 195
            .|:.|..|.|..|:...|.:......|..|.:...|:....:.:.....|....|..::     |
pombe   381 LTTHVFDPISPTALSNSVLNYDSNNFSGTPQINVVPSSPSKSQSGPSLPANPLLQTDISITYSQS 445

  Fly   196 AAHLSSFTASLNASLHHSQSLRRNLGHPLAAAAAVAAVAQSQA---------VPNL----QHTLE 247
            |:.:|...| :|.:.:..|:  .||..|..:....|....:.|         :|.|    .|:.|
pombe   446 ASPVSGQPA-MNENSYDLQN--ANLCAPEMSPTYTARHRSNSAGSRFDAYEPIPQLYTHFSHSSE 507

  Fly   248 KSPVAQRTAQSSGLQANLKRKRSPQDQGEVTPPPASTATSATGARSRSPSPQGSIEDSSPGSASG 312
            ...|.|.| :..|...|...|.:.......|.|.:.:..|..|.:|.:.|   |.:..|...:.|
pombe   508 CLSVNQDT-ELLGKIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSS---SSKAKSESKSQG 568

  Fly   313 GKPKTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQ 377
            ....||:  .|.|.|...|||..||..||..|||.|.:|.|.|.:.....||:.:||..|...|.
pombe   569 NYVCTFA--GCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACV 631

  Fly   378 TCGKAFNRSSTLNTHSRIHAGYKPFVCEYCGKGFHQKG 415
            ||.:.|.|...||.|      ||..|.:.|.:...::|
pombe   632 TCNQRFARMDALNRH------YKSEVGQNCLRTATERG 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 41/121 (34%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
zf-H2C2_2 363..385 CDD:463886 9/21 (43%)
C2H2 Zn finger 376..396 CDD:275368 8/19 (42%)
C2H2 Zn finger 404..424 CDD:275368 2/12 (17%)
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..478 CDD:275368
prz1NP_593073.1 COG5048 121..620 CDD:227381 103/442 (23%)
C2H2 Zn finger 577..594 CDD:275368 8/16 (50%)
C2H2 Zn finger 602..622 CDD:275368 6/19 (32%)
C2H2 Zn finger 630..648 CDD:275368 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.

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