DRSC/TRiP Functional Genomics Resources

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Protein Alignment erm and Zscan5b

DIOPT Version :9

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_573467.2 Gene:Zscan5b / 170734 MGIID:2159640 Length:468 Species:Mus musculus


Alignment Length:252 Identity:91/252 - (36%)
Similarity:108/252 - (42%) Gaps:46/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 AAAAAVAAVAQSQ------AVPNLQHTLEKSPVAQRTAQS-SGLQANLKRKRSPQDQG------- 275
            |.:..|....|.|      |||:..|.||:.....|..|| ||.  ||     |..||       
Mouse   239 AGSLGVKGAVQPQEDTVVDAVPSFTHILERDLALNRDLQSLSGF--NL-----PTSQGVASYMGN 296

  Fly   276 ------EVTPPPASTATSATGARSRSPSPQGSIEDSSPGSASGGKPKTFSCLECGKVFNAHYNLT 334
                  ...|.||            :|.|:..: ||..|.|      .|.|.||.|.|.......
Mouse   297 TEDGLEAANPEPA------------NPQPEKQV-DSLAGQA------RFQCTECKKSFLYKSRFD 342

  Fly   335 RHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQTCGKAFNRSSTLNTHSRIHAGY 399
            .|...|||.|||.|.:|.|.|.|:|.|..|:.:||.|||:.|:.||..|...|||..|||:|...
Mouse   343 LHQRSHTGERPFKCILCNKAFVQSSDLRVHQRVHTGEKPYMCEVCGMEFAHGSTLQGHSRVHTKE 407

  Fly   400 KPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYKCNICNKAFHQVYNLTFHMHTHNDKK 456
            |||||:.||:.|..|||...|...|...:.|.|..|||.|.|......||.||..|:
Mouse   408 KPFVCKDCGQRFCHKGNLNVHFRIHCNLRPYVCKKCNKTFRQQGTWKRHMKTHLRKR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381 68/162 (42%)
C2H2 Zn finger 320..340 CDD:275368 6/19 (32%)
zf-H2C2_2 332..357 CDD:290200 11/24 (46%)
zf-C2H2 346..368 CDD:278523 9/21 (43%)
C2H2 Zn finger 348..368 CDD:275368 8/19 (42%)
zf-H2C2_2 363..385 CDD:290200 10/21 (48%)
C2H2 Zn finger 376..396 CDD:275368 10/19 (53%)
zf-H2C2_2 389..413 CDD:290200 13/23 (57%)
C2H2 Zn finger 404..424 CDD:275368 8/19 (42%)
zf-H2C2_2 416..441 CDD:290200 9/24 (38%)
C2H2 Zn finger 432..452 CDD:275368 8/19 (42%)
C2H2 Zn finger 460..478 CDD:275368
Zscan5bNP_573467.2 SCAN 33..117 CDD:153421
C2H2 Zn finger 328..348 CDD:275368 6/19 (32%)
zf-H2C2_2 344..365 CDD:372612 11/20 (55%)
C2H2 Zn finger 356..376 CDD:275368 8/19 (42%)
zf-H2C2_2 368..393 CDD:372612 11/24 (46%)
C2H2 Zn finger 384..404 CDD:275368 10/19 (53%)
zf-H2C2_2 397..419 CDD:372612 12/21 (57%)
zf-C2H2 410..432 CDD:333835 10/21 (48%)
C2H2 Zn finger 412..432 CDD:275368 8/19 (42%)
zf-C2H2 438..460 CDD:333835 9/21 (43%)
C2H2 Zn finger 440..460 CDD:275370 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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