DRSC/TRiP Functional Genomics Resources

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Protein Alignment erm and zbtb3

DIOPT Version :10

Sequence 1:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster
Sequence 2:NP_001116908.1 Gene:zbtb3 / 100144674 XenbaseID:XB-GENE-991962 Length:709 Species:Xenopus tropicalis


Alignment Length:46 Identity:11/46 - (23%)
Similarity:19/46 - (41%) Gaps:4/46 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 VEHPPKEVQFSISPDTLQKTAKE----RISIPRFLISGTLDSTDCC 189
            :.|...||..:::.:.||::.:|    |......|..|......||
 Frog   165 LNHQVSEVFNTVAQELLQRSDEEGQALRGDAAVALNKGPARQAKCC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ermNP_001259891.2 COG5048 <295..461 CDD:227381
C2H2 Zn finger 320..340 CDD:275368
C2H2 Zn finger 348..368 CDD:275368
zf-H2C2_2 363..385 CDD:463886
C2H2 Zn finger 376..396 CDD:275368
C2H2 Zn finger 404..424 CDD:275368
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..478 CDD:275368
zbtb3NP_001116908.1 BTB_POZ_ZBTB3 1..127 CDD:349632
PRK10905 293..>503 CDD:236792
C2H2 Zn finger 638..658 CDD:275368
zf-H2C2_2 651..675 CDD:463886
C2H2 Zn finger 666..684 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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