DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt16

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001039091.1 Gene:galnt16 / 733908 XenbaseID:XB-GENE-986567 Length:562 Species:Xenopus tropicalis


Alignment Length:630 Identity:240/630 - (38%)
Similarity:337/630 - (53%) Gaps:99/630 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RMRSNTCRIVLLTSLVWVIFDFVLIAR----YSDCIGKDGWRCKRSGEYDVE-----LPNAERLV 68
            |:|:|.  |.:|| :.|::..|..:.:    ::....|...|.:.:|..:|.     .|.|..|.
 Frog     3 RIRANA--IAILT-VAWILGTFYYLWQDSKPHAAASSKSPGRSRAAGRQEVHREDRTSPEAVTLA 64

  Fly    69 DDNQLVDDNEINTEKSLDGESGGALIMGQGFASGGISMTYPSVVLKKWFLAPSVQEAKGKPGEMG 133
                      ..|||              |..:|....:|    |...|:         |.||  
 Frog    65 ----------FQTEK--------------GKLNGFDEKSY----LSSKFI---------KAGE-- 90

  Fly   134 KPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVRHEGCRRKHYASKLPTTSIVIVFHNE 198
                          :.::::.||.|.||.:|..|.:.|.||..|...|:.:.||:||::|.||||
 Frog    91 --------------DPYRQHAFNQLESDKLSSERPIRDTRHYRCTSVHHDNDLPSTSVIITFHNE 141

  Fly   199 AWTTLLRTVWSVINRSPRALLKEIILVDD-ASERDFLGKQLEEYVAKLPVKTFVLRTEKRSGLIR 262
            |.:|||||:.||:.|||..|::||||||| :::.|..     :.:.|:| |...||..:|.||||
 Frog   142 ARSTLLRTIKSVLIRSPGNLIQEIILVDDFSTDPDDC-----QLLTKIP-KVKCLRNNRREGLIR 200

  Fly   263 ARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDETFEYITASDSTW 327
            :|:.|||..:..|:||||:|||....||:|||.|:..:...||.|||||||.:.|.|:.||....
 Frog   201 SRVRGAELAAAPVLTFLDSHCEVNNEWLQPLLQRVKDDHTRVVSPIIDVISLDNFAYLAASADLR 265

  Fly   328 GGFNWKLNFRWYRVP-SREMARRNNDRTAPLRTPTMAGGLFSIDKDYFYEIGSYDEGMDIWGGEN 391
            |||:|.|:|:|.::| .::|:|  .|.|:.:|||.:|||:|.|||.:|.::|.||..||||||||
 Frog   266 GGFDWSLHFKWEQIPIEQKMSR--TDPTSSIRTPVIAGGIFVIDKSWFNQLGKYDTQMDIWGGEN 328

  Fly   392 LEMSFRVWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLVEVWLDDWKEFYYSFY 456
            .|:|||||||||.|||.|||||||||||..||.||.|.......|..|.||||:|::|::||...
 Frog   329 FELSFRVWMCGGSLEIVPCSRVGHVFRKRHPYEFPDGNALTYIKNTKRTVEVWMDEYKQYYYQAR 393

  Fly   457 PGARKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLDYYYLGEIRNA----ETETCLDTM 517
            |.|...|.|.|:||..||.:|.||||:|||:|||||..:|......|.|:..    |::| .||.
 Frog   394 PSAIGKSYGSVADRVELRKKLSCKSFQWYLQNVYPELKIPEKEVISGLIKQGGNCMESQT-RDTT 457

  Fly   518 GRKYNEKVGISYCHGLGGN----QVFAYTKRQQIMSDDLCLDASS-SNGPVNMVR-CHNMGGNQE 576
            |   |..|.::.|.|...:    |.:|.:: ..|...|.||..|| |.|.:.|:. |:.....|:
 Frog   458 G---NIPVMLTQCKGSANSAPAAQEWALSE-NVIKQQDRCLTISSFSTGALVMLEPCNQKDSRQK 518

  Fly   577 WVYDAEEKWIRHTNTGQCLQ-RATRDDANTPLLRPC-SYGKGQQW 619
            |  ..:..:::|..:..||. .:||     .::.|| |....|||
 Frog   519 W--KLKGHFLQHIGSALCLDTHSTR-----AVINPCQSDLLSQQW 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 158/301 (52%)
Ricin_B_lectin 503..619 CDD:395527 34/127 (27%)
galnt16NP_001039091.1 pp-GalNAc-T 133..427 CDD:133004 158/301 (52%)
Ricin_B_lectin 439..556 CDD:366226 34/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.