DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt1

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_031759269.1 Gene:galnt1 / 594943 XenbaseID:XB-GENE-1013398 Length:559 Species:Xenopus tropicalis


Alignment Length:606 Identity:357/606 - (58%)
Similarity:420/606 - (69%) Gaps:61/606 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CRIVLLTSLVWVIFDFVLIARYSDCIGKDGWRCKRSGEYDVELPNAERLVDDNQLVDDNEINTEK 83
            |::||.||||||..|..|:..:|:|.     :|                       ||.:   |:
 Frog     7 CKVVLATSLVWVFLDMFLLLYFSECN-----KC-----------------------DDKK---ER 40

  Fly    84 SLDGESGGALIMGQGFASGGISMTYPSVVLKKWFLAPSV-QEAKGKPGEMGKPVKIPADMKDLMK 147
            .|.|..|                             |.: |:....||||||||.||.:.::.||
 Frog    41 GLPGGDG-----------------------------PDINQKPHEGPGEMGKPVVIPKEEQEKMK 76

  Fly   148 EKFKENQFNLLASDMISLNRSLTDVRHEGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTVWSVIN 212
            |.||.|||||:||:||:|||||.|||.|||:.|.|...|||||:||||||||||||||||.||||
 Frog    77 EMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDSLPTTSVVIVFHNEAWTTLLRTVHSVIN 141

  Fly   213 RSPRALLKEIILVDDASERDFLGKQLEEYVAKLPVKTFVLRTEKRSGLIRARLLGAEHVSGEVIT 277
            ||||.||:|||||||||||:||.:.||.||.||.|...|||.|:|||||||||.||....|:|||
 Frog   142 RSPRHLLQEIILVDDASEREFLKRPLETYVKKLTVPVHVLRMEQRSGLIRARLRGAAASKGQVIT 206

  Fly   278 FLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDETFEYITASDSTWGGFNWKLNFRWYRVP 342
            |||||||||.||||||||||..:||||||||||||||:||||:..||.|:||||||||||||.||
 Frog   207 FLDAHCECTVGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVP 271

  Fly   343 SREMARRNNDRTAPLRTPTMAGGLFSIDKDYFYEIGSYDEGMDIWGGENLEMSFRVWMCGGVLEI 407
            .|||.||..|||.|:|||||||||||||:|||.|||:||.|||||||||||:|||:|.|||.|||
 Frog   272 QREMDRRRGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEI 336

  Fly   408 APCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLVEVWLDDWKEFYYSFYPGARKASAGDVSDRKA 472
            ..||.|||||||:|||||||||.:|:|.||.||.|||:|::|.|:|...||..|...||:|.|..
 Frog   337 VTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISTRVG 401

  Fly   473 LRDRLKCKSFRWYLENVYPESLMPLDYYYLGEIRNAETETCLDTMGRKYNEKVGISYCHGLGGNQ 537
            ||.:|:||.|.||||||||:|.:|..||.||||||.||..|||.|.||.||||||..|||:||||
 Frog   402 LRHKLQCKPFSWYLENVYPDSQIPRHYYSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQ 466

  Fly   538 VFAYTKRQQIMSDDLCLDASSSNGPVNMVRCHNMGGNQEWVYDAEEKWIRHTNTGQCLQRATRDD 602
            ||:||..::|.:||||||.|..||||.|::||::.|||.|.||..:..:.|.|:.|||.:|..:|
 Frog   467 VFSYTASKEIRTDDLCLDVSKLNGPVIMLKCHHLRGNQLWEYDPVKLTLVHVNSNQCLDKAAEED 531

  Fly   603 ANTPLLRPCSYGKGQQWLMES 623
            :..|.:|.||..:.||||:.:
 Frog   532 SQVPSIRDCSGSRSQQWLLRN 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 220/299 (74%)
Ricin_B_lectin 503..619 CDD:395527 63/115 (55%)
galnt1XP_031759269.1 pp-GalNAc-T 119..419 CDD:133004 220/299 (74%)
Ricin_B_lectin 432..548 CDD:395527 63/115 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 294 1.000 Domainoid score I1475
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8469
Inparanoid 1 1.050 669 1.000 Inparanoid score I741
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194016at33208
OrthoFinder 1 1.000 - - FOG0002015
OrthoInspector 1 1.000 - - otm48271
Panther 1 1.100 - - LDO PTHR11675
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2292
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

Return to query results.
Submit another query.