DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt8b.1

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_021331085.1 Gene:galnt8b.1 / 559373 ZFINID:ZDB-GENE-041210-83 Length:629 Species:Danio rerio


Alignment Length:597 Identity:190/597 - (31%)
Similarity:287/597 - (48%) Gaps:123/597 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SVQEAKGKPGEMGKPVKIPADMKDLMK---------------EKFKENQFNLLASDMISLNRSLT 170
            :|:|::.|.....||.|......||.|               :.|::..:|...||.:.|:|.|.
Zfish    63 AVEESRLKVKSEKKPAKKLFPDSDLFKRWSVELSEDEQRKAEDLFQKYGYNAFLSDRLPLDRELP 127

  Fly   171 DVRHEGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLG 235
            |.|...|..:.|...|||.|:|:::.:||.:.:.|.|:|:|||:|..||||||||||.|..:.|.
Zfish   128 DTRDHRCAEREYPPDLPTVSVVLIYLDEALSVIQRAVYSIINRTPAHLLKEIILVDDHSTNEDLQ 192

  Fly   236 KQLEEYVAKLPVK-----TFVLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLA 295
            .||..|::.:..|     ..|...|:: ||.:||:.|.:..||:|:..||||.|....|.|||||
Zfish   193 TQLHVYISSINEKHPGLVKMVTHAEQK-GLSQARISGWKAASGDVVAILDAHIEVHVKWAEPLLA 256

  Fly   296 RIVQNRRTVVCPIIDVISDETFEYITASDSTWGGFNWKL-----NF--RWYRVPSREMARRNNDR 353
            ||..:|..|:.|:.|.|:.:..| :|...::..||:|.|     .|  :||         ..||.
Zfish   257 RIQADRTLVLSPVFDKINYDDLE-VTKYFASAHGFDWALWCMYVTFPKKWY---------NRNDP 311

  Fly   354 TAPLRTPTMAGGLFSIDKDYFYEIGSYDEGMDIWGGENLEMSFR--------------------- 397
            :.|.::|::. |:..:|:.:|.|||:.||||.::||||:|:..|                     
Zfish   312 SLPGKSPSVM-GILVVDRLFFGEIGTLDEGMQVYGGENVELGIRVIHHHTEAFIILLYLHVEQWC 375

  Fly   398 -------------VWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLVEVWLDDWK 449
                         ||:|||.:|:.|||::.|:.|...|| .| ..:.::..|..|:.|||:|::|
Zfish   376 CCSLLTLGCVLAQVWLCGGSIEVVPCSKIAHIERAHKPY-MP-DLSNVMKRNALRVAEVWMDEYK 438

  Fly   450 EFYYSFYPGA----RKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLD--YYYLGEIRNA 508
            :..|..: |.    .....||:|:||.||:||.||.|:|||||||.| |.|:|  ..|...|.:.
Zfish   439 KNVYMAW-GLPLENHGIDIGDLSERKKLRERLNCKPFKWYLENVYTE-LNPMDDLLGYGALINDL 501

  Fly   509 ETETCLDTMGRKYNEKVGISYCHGLGGNQVFAYTKRQQIM---------SDDLCL-DASSSNGPV 563
            :|..|||....:.|..: :..||.| .:|||.||...:|:         |.:.|| |..|...| 
Zfish   502 QTSLCLDKGPSEENTPI-LYPCHFL-TSQVFFYTTSGEILVGPLQPLLHSRNRCLADPGSGRFP- 563

  Fly   564 NMVRCHNMGGNQEWVYDAEEK----W-------IRHTNTGQCLQ---RATRDDANTPLLRPCSYG 614
                      ...|..|.|:.    |       |::.:|.:||:   :.|.|..|...::.|   
Zfish   564 ----------EFSWCSDTEKPKHMYWDFKQGQAIQNRDTKRCLEISPKQTGDYKNNVFVQEC--- 615

  Fly   615 KGQQWLMESKFK 626
            :.|.|.::...|
Zfish   616 RNQHWRIQHVIK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 124/349 (36%)
Ricin_B_lectin 503..619 CDD:395527 34/139 (24%)
galnt8b.1XP_021331085.1 pp-GalNAc-T 147..482 CDD:133004 124/349 (36%)
Ricin_B_lectin 494..620 CDD:306998 35/141 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586995
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.