DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and poc1bl

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001038243.2 Gene:poc1bl / 503760 ZFINID:ZDB-GENE-050306-41 Length:582 Species:Danio rerio


Alignment Length:629 Identity:247/629 - (39%)
Similarity:348/629 - (55%) Gaps:86/629 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RIVLLTSLVWVIFDFVLIARYS--DCIGKDGWRCKRSGEYDVELPNAERLVDDNQLVDDNEINTE 82
            ::..|.||:|:.  .:||.|.|  .....||.|       |:       |..|...:::.|.::|
Zfish    14 KVCFLFSLLWLF--CLLIVRSSPPSLADNDGRR-------DI-------LARDLPPIEEEEEDSE 62

  Fly    83 KSLDGESGGALIMGQGFASGGISMTYPSVVLKKWFLAPSVQEAKGKPGEMGKPVKIPADMKDLMK 147
            ..|                        ..|.:|  |.|.    ...|||.|:..::     .|..
Zfish    63 NLL------------------------RPVYEK--LPPD----SNAPGEYGRATRL-----TLTS 92

  Fly   148 EKFKENQ-------FNLLASDMISLNRSLTDVRHEGCRRKHY-ASKLPTTSIVIVFHNEAWTTLL 204
            |:.||.:       .|:..||.|||:|.:.|.|...|:.|.| ..:|||||:||.|:||||:|||
Zfish    93 EEKKEEEASVERCAINIFISDKISLHRHIQDNRMHECKAKKYNIRRLPTTSVVIAFYNEAWSTLL 157

  Fly   205 RTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAKLPVKTFVLRTEKRSGLIRARLLGAE 269
            ||:.||:..:|..|||:||||||.|:|.:|..||.:|::.|. :..::||:||.||:||||:||.
Zfish   158 RTIHSVLETTPAVLLKDIILVDDFSDRGYLKSQLAQYISNLE-RVRLIRTKKREGLVRARLIGAT 221

  Fly   270 HVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDETFE-YITASDSTWGGFNWK 333
            :.:|.|:||||.||||..||:||||.||.:|..|::||:||.|...||| |:...:...|||:|:
Zfish   222 YATGSVLTFLDCHCECVPGWIEPLLERIAENETTIICPVIDTIDWNTFEFYMQTEEPMVGGFDWR 286

  Fly   334 LNFRWYRVPSREMARR-NNDRTAPLRTPTMAGGLFSIDKDYFYEIGSYDEGMDIWGGENLEMSFR 397
            |.|:|:.||  |:.|: ...|..|:|:||||||||::.|.||..:|:||.||::|||||||:|||
Zfish   287 LTFQWHAVP--EIDRKIRKSRIDPIRSPTMAGGLFAVSKAYFEYLGTYDMGMEVWGGENLELSFR 349

  Fly   398 VWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLVEVWLDDWKEFYYSFYPGARKA 462
            ||.|||.|||.|||.|||||.|..||     .......|..|..|||:|.:|:.:|:..|.|||.
Zfish   350 VWQCGGSLEIHPCSHVGHVFPKKAPY-----ARSNFLQNTVRAAEVWMDTYKQHFYNRNPPARKE 409

  Fly   463 SAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLDY-YYLGEIRNAETET-CLDTMGRKYN--- 522
            |.||:|:|..||:||:||||.|||:||||...:|.|. .:.|.:|:|...: |||.....:|   
Zfish   410 SYGDISERIVLRNRLQCKSFEWYLQNVYPGLHVPEDRPGWHGAVRSAGIHSECLDYNAPDHNPTG 474

  Fly   523 EKVGISYCHGLGGNQVFAYTKRQQIMSD---DLCLDASSSNGPVNMVRCHNMGGNQE----WVYD 580
            ..:.:..|||.||||.|.||.:::|..:   :||.:.......:.|..|...|..:.    |.: 
Zfish   475 AHLSLFGCHGQGGNQYFEYTSQREIRFNSVTELCAEVQDGMTHIGMKHCPQDGVPKPPSIIWQF- 538

  Fly   581 AEEKWIRHTNTGQCLQRATRDDANTPL-LRPCSYG-KGQQWLME 622
            .|:..|.|.::..|:.....::....: :|.||.| |.|:|..|
Zfish   539 REDGSIFHPHSNMCITSYRTEEGRADIQMRSCSTGDKHQRWSFE 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 161/301 (53%)
Ricin_B_lectin 503..619 CDD:395527 34/128 (27%)
poc1blNP_001038243.2 WcaA 139..434 CDD:223539 163/302 (54%)
pp-GalNAc-T 143..437 CDD:133004 161/301 (53%)
RICIN 451..581 CDD:238092 35/130 (27%)
Ricin_B_lectin 451..579 CDD:279046 34/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586973
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.