DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and Galnt12

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_232988.6 Gene:Galnt12 / 313233 RGDID:1562001 Length:576 Species:Rattus norvegicus


Alignment Length:528 Identity:233/528 - (44%)
Similarity:316/528 - (59%) Gaps:40/528 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PSVQEAKGKPGEMGKPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVRHEGCRR-KHYA 183
            |...:|.|..||..: :::..:...|.:|..:.:|.|:..||.|||:|.|.:..:..||. |:..
  Rat    64 PLPADALGAKGEAVR-LQLQGEELRLQEESVQRHQINIYLSDRISLHRRLPERWNPLCREVKYDY 127

  Fly   184 SKLPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAKLPVK 248
            ..||.||:||.|:||||:||||||:||:..||..||:|:|||||.|:|:.|.:.|...:::|| |
  Rat   128 DNLPKTSVVIAFYNEAWSTLLRTVYSVLETSPDILLEEVILVDDYSDREHLKEPLANELSQLP-K 191

  Fly   249 TFVLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVIS 313
            ..::|..||.||:|||||||....|||:||||.||||.||||||||.||.:....||||:||||.
  Rat   192 VRLIRASKREGLVRARLLGASAARGEVLTFLDCHCECHEGWLEPLLQRIHEKESAVVCPVIDVID 256

  Fly   314 DETFEYI-TASDSTWGGFNWKLNFRWYRVPSRE--MARRNNDRTAPLRTPTMAGGLFSIDKDYFY 375
            ..||||: .:.:...|||:|:|.|.|:.||.||  :.|...|   .:|:||||||||::.|.||.
  Rat   257 WNTFEYLGNSGEPQIGGFDWRLVFTWHVVPQRERKLMRSPID---VIRSPTMAGGLFAVSKRYFE 318

  Fly   376 EIGSYDEGMDIWGGENLEMSFRVWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVNHNNARL 440
            .:||||.||::|||||||.|||:|.|||.||..|||.|||||.|..||:......     |:.|.
  Rat   319 YLGSYDTGMEVWGGENLEFSFRIWQCGGTLETHPCSHVGHVFPKQAPYSRSKALA-----NSVRA 378

  Fly   441 VEVWLDDWKEFYYSFYPGARKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLDY-YYLGE 504
            .|||:||:||.||...|.||....|||::||.||.:|:||.|:|:|:.||||..:|.|. .:.|.
  Rat   379 AEVWMDDFKELYYHRNPQARLEPFGDVTERKKLRAKLQCKDFKWFLDTVYPELHVPEDRPGFFGM 443

  Fly   505 IRNAETE-TCLDTMGRKYN---------EKVGISYCHGLGGNQVFAYTKRQQI----MSDDLCLD 555
            :.|.... .|||     ||         .:|.:..|||:|.||.|.||.||:|    ...:.|:.
  Rat   444 LENRGLRGYCLD-----YNPPSENNVEGHQVLLYLCHGMGQNQFFEYTSRQEIRYNTRQPEACIA 503

  Fly   556 ASSSNGPVNMVRCHN-MGGNQEWVYDAEEKWIRHTNTGQCLQRATRDDANT---PLLRPCSYGKG 616
            .......:.|..|.: :..|||:|.. |:..:.|..:|:|:: ||..:.:|   |.||.||....
  Rat   504 VEEGKDVLIMDLCKDTVPENQEFVLQ-EDGTLVHKQSGKCVE-ATEKEFDTSFAPHLRDCSSSDN 566

  Fly   617 QQWLMESK 624
            |:||.:.:
  Rat   567 QRWLFKER 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 163/302 (54%)
Ricin_B_lectin 503..619 CDD:395527 40/133 (30%)
Galnt12XP_232988.6 pp-GalNAc-T 134..428 CDD:133004 163/302 (54%)
Ricin_B_lectin 440..569 CDD:395527 40/135 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345981
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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