DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and Galntl6

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_017168336.2 Gene:Galntl6 / 270049 MGIID:1913581 Length:695 Species:Mus musculus


Alignment Length:537 Identity:222/537 - (41%)
Similarity:313/537 - (58%) Gaps:46/537 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 KKWFLAPSVQE---AKGKPGEMGKPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVRHE 175
            |.|....|:|.   ..|| ||.|||..:..:.:|  ...::||.||:..|:.|:|.|||.|:||.
Mouse   161 KDWHDYESIQRDALRSGK-GEHGKPYPLTEEDRD--DSAYRENGFNIFVSNNIALERSLPDIRHA 222

  Fly   176 GCRRKHYASKLPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEE 240
            .|:.|.|..:||.|||:|.||||.||:||||:.|:|||:|.:|:.|||||||.|:|:.|..:||:
Mouse   223 NCKHKMYLERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHLKDKLED 287

  Fly   241 YVAKLPVKTFVLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVV 305
            |:|:.. |..::||:||.||||.|||||....|||:||||:|||....||.|||.:|..|.:|:|
Mouse   288 YMARFS-KVRIVRTKKREGLIRTRLLGASVARGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIV 351

  Fly   306 CPIIDVISDETFEY-ITASDSTWGGFNWKLNFRWYRVPSREMARRNNDRTAPLRTPTMAGGLFSI 369
            ||:||||....|.| ..|.|:..|.|:|::.::...:|. |:.|.  |.:.|..:|.||||||::
Mouse   352 CPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPP-ELQRA--DPSDPFESPVMAGGLFAV 413

  Fly   370 DKDYFYEIGSYDEGMDIWGGENLEMSFRVWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVN 434
            |:.:|:|:|.||.|::|||||..|:||:||||||.:...|||||||::||..||..|.||:  :.
Mouse   414 DRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRKYVPYKVPSGTS--LA 476

  Fly   435 HNNARLVEVWLDDWKEFYYSFYPGARKASAGDVSDRKALRDRLKCKSFRWYLENV-------YPE 492
            .|..|:.|.|:|::.|:.|...|..|..|.||:|.:|.||.|||||.|:|::..|       || 
Mouse   477 RNLKRVAETWMDEFAEYIYQRRPEYRHLSTGDISAQKELRKRLKCKDFKWFMAAVAWDVPKYYP- 540

  Fly   493 SLMPLDYYYLGEIRNAETETCLDTMGRKYNEKVGISYCHGLGG------NQVFAYTKRQQIMSDD 551
            .:.||...: ||||:.....|:|:.......::.:..|...|.      .|:|.:..|:.|...:
Mouse   541 PVEPLPAAW-GEIRSVAANLCVDSKHGATGTELRLDVCVKDGSERTWSHEQLFTFGWREDIRPGE 604

  Fly   552 ------LCLDASSSNGPVNMVRCHNMGGNQEWVYDAEEKWIRHTNTGQCLQRATRDDANTP---- 606
                  .||||.|.:.||.:..||.|.|||.|.| .|::.:.|..:..|:      |.|..    
Mouse   605 PLHTRKFCLDAISHSSPVTLYDCHGMKGNQLWGY-REDRTLFHPVSNSCM------DCNPSEKKI 662

  Fly   607 -LLRPCSYGKGQQWLME 622
             :.|.....:.|||:.|
Mouse   663 FMARCDPLSETQQWIFE 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 150/307 (49%)
Ricin_B_lectin 503..619 CDD:395527 34/132 (26%)
Galntl6XP_017168336.2 pp-GalNAc-T 237..532 CDD:133004 149/300 (50%)
Ricin_B_lectin 548..676 CDD:366226 34/135 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842566
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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