DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and gly-10

DIOPT Version :10

Sequence 1:NP_608906.2 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001041036.2 Gene:gly-10 / 178343 WormBaseID:WBGene00001635 Length:703 Species:Caenorhabditis elegans


Alignment Length:542 Identity:227/542 - (41%)
Similarity:314/542 - (57%) Gaps:47/542 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KWFLAPSVQEAKGK--PGEMGKPVKIPADMKDLMKEK---FKENQFNLLASDMISLNRSLTDVRH 174
            ||....:.::.|.:  |||.|||||:|.| |::.||.   :|.|.:|...|||||||||:.|:||
 Worm   162 KWEDEAAYEKEKRREGPGEWGKPVKLPED-KEVEKEALSLYKANGYNAYISDMISLNRSIKDIRH 225

  Fly   175 EGCRRKHYASKLPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLE 239
            :.|:...|::||||.|::..||.|..:||||:|:|||||||..||||||||||.||:..|.:.||
 Worm   226 KECKNMMYSAKLPTVSVIFPFHEEHNSTLLRSVYSVINRSPPELLKEIILVDDFSEKPALRQPLE 290

  Fly   240 EYVAKLPVKTF--VLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRR 302
            :::.|..:...  ||||:||.||||.|.|||:..:||::.|||||.|....||.|||..|.::.|
 Worm   291 DFLKKNKIDHIVKVLRTKKREGLIRGRQLGAQDATGEILIFLDAHSEANYNWLPPLLDPIAEDYR 355

  Fly   303 TVVCPIIDVISDETFEYITASDSTWGGFNWKLNFRWYRVPSREMARRNNDRTAPLRTPTMAGGLF 367
            |||||.:|||..||:|.....:...|.|:|..|::  |:|..:..|.:  .|.|..:|.||||.|
 Worm   356 TVVCPFVDVIDCETYEVRPQDEGARGSFDWAFNYK--RLPLTKKDRES--PTKPFNSPVMAGGYF 416

  Fly   368 SIDKDYFYEIGSYDEGMDIWGGENLEMSFRIWQCGGILEIIPCSHVGHVFRDK-SPYTFPGGVAK 431
            :|...:|:|:|.||||:||||||..|:||::|||.|.:...|||.|.|::|.| :|:. ..|:..
 Worm   417 AISAKWFWELGGYDEGLDIWGGEQYELSFKVWQCHGRMVDAPCSRVAHIYRCKYAPFK-NAGMGD 480

  Fly   432 IVLHNAARVAEVWLDEWRDFYYSMSTGARKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMP 496
            .|..|..||||||:|::::..|....|...|.|||:...|.:|::|:||||.|:::    |....
 Worm   481 FVSRNYKRVAEVWMDDYKETLYKHRPGVGNADAGDLKLMKGIREKLQCKSFDWFMK----EIAFD 541

  Fly   497 LDYYY---------LGEIRNAETETCLDTMGRKYNEKVGISYC-----HGLGGNQVFAYTKRQQI 547
            .|.||         .|||||..|..|:||..::.|::.|:..|     .| ||.|....|:...|
 Worm   542 QDKYYPAVEPKASAEGEIRNVGTNFCIDTQFKEQNQRFGLRKCTSDDKDG-GGEQDLRLTRWHDI 605

  Fly   548 --MSDDLCLDASSS--NGPVNMVRCHNMGGNQEWVYDAEEKWIRHTNTGQCLQRATRDDANTPLL 608
              ....:|.|.|:|  ..||.:..||:|.|||.:.|...:|.|.|..:||||   |.|:.....|
 Worm   606 RPKGRKICFDCSTSVDKAPVILFDCHSMKGNQLFKYRVAQKQIYHPISGQCL---TADENGKGFL 667

  Fly   609 --RPCSYGKGQQWLMESKFKWQ 628
              :.|......|     |:.||
 Worm   668 HMKKCDSSSDLQ-----KWAWQ 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_608906.2 pp-GalNAc-T 190..490 CDD:133004 140/302 (46%)
beta-trefoil_Ricin_GALNT1-like 497..623 CDD:467311 46/145 (32%)
gly-10NP_001041036.2 pp-GalNAc-T 241..539 CDD:133004 141/306 (46%)
beta-trefoil_Ricin_GALNT10-like 555..683 CDD:467317 44/136 (32%)

Return to query results.
Submit another query.