DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant5 and gly-6

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001022644.1 Gene:gly-6 / 175558 WormBaseID:WBGene00001631 Length:618 Species:Caenorhabditis elegans


Alignment Length:671 Identity:261/671 - (38%)
Similarity:365/671 - (54%) Gaps:116/671 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MRGRMRSNTCRI--VLLTSL--VWVIFDFVLIARYSDCIGKDGWRCKRS-------------GEY 57
            :|.|.||..|.:  |.|...  :|..|...|:......||:|....:::             |.|
 Worm     6 IRSRRRSRRCVVYSVFLFGFLALWGSFALALVFLSDMYIGEDQISTQKAIKPIARSNYHVVVGHY 70

  Fly    58 DVELPNAERLVDDNQLVDDNEINTEKSLDGESGGALIMGQGFASGGISMTYPSVVLKKWFLAPSV 122
            :..||.     |..:.:...|:|.......:..|         .||..:::         |.|..
 Worm    71 NGNLPE-----DKKRNLTSEELNANLYAPHDDWG---------EGGAGVSH---------LTPEQ 112

  Fly   123 QEAKGKPGEMGKPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVRHEGCRRKHYASKLP 187
            |:                    |....|..||||||.||.||:.|||.::|...||...|...||
 Worm   113 QK--------------------LADSTFAVNQFNLLVSDGISVRRSLPEIRKPSCRNMTYPDNLP 157

  Fly   188 TTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLG-KQLEEYVAKLPVKTFV 251
            |||::||:||||::||||||||||:|||:.||||||||||.|:|:||. ..|:..:..||....:
 Worm   158 TTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFLRYPTLDTTLKPLPTDIKI 222

  Fly   252 LRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDET 316
            :|:::|.||||||::||:...|:|:||||:|||||:|||||||.||..||:.|.||:||:|:|.|
 Worm   223 IRSKERVGLIRARMMGAQEAQGDVLTFLDSHCECTKGWLEPLLTRIKLNRKAVPCPVIDIINDNT 287

  Fly   317 FEYITASDSTWGGFNWKLNFRWYRVPSREMARRNNDRTAPLRTPTMAGGLFSIDKDYFYEIGSYD 381
            |:|....:...|||||.|.||||.:|:....:...|.|.|:.:||||||||||:::||.|:|.||
 Worm   288 FQYQKGIEMFRGGFNWNLQFRWYGMPTAMAKQHLLDPTGPIESPTMAGGLFSINRNYFEELGEYD 352

  Fly   382 EGMDIWGGENLEMSFRVWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTT-EIVNHNNARLVEVWL 445
            .|||||||||||||||:|.|||.:||.|||.||||||||:|:.|||.:: :::|.|..|:.|||:
 Worm   353 PGMDIWGGENLEMSFRIWQCGGRVEILPCSHVGHVFRKSSPHDFPGKSSGKVLNTNLLRVAEVWM 417

  Fly   446 DDWKEFYYSFYPGA-RKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLDYYYLGE----- 504
            ||||.::|...|.| |..|:.|||:|..||.:|.||||:|||:||:.:..:|......|.     
 Worm   418 DDWKHYFYKIAPQAHRMRSSIDVSERVELRKKLNCKSFKWYLQNVFQDHFLPTPLDRFGRMTSSS 482

  Fly   505 --------------IRNAETETCLDTMGRKYNEKVGISYCHGLGGNQVFAYTKRQQIMSDD-LCL 554
                          |:.|.|..||....:                .|::.||..::|.:|: |||
 Worm   483 NSSVCLAWTLRSSGIKTASTADCLKIFHK----------------TQLWLYTGDRRIRTDEHLCL 531

  Fly   555 DA-----SSSNGPVNMVRCHNMGGNQEWVYDAEEKWIRHTN--TGQCLQR-----ATRDDANTPL 607
            ..     ::|:..:.:..|  .|.:.|: :|.:.|..|..|  ||.||..     .|:|:.|.|:
 Worm   532 SVVQLLHTTSDWKIQLKEC--AGFDTEY-WDFKPKIGRFQNRKTGLCLASPDIFDPTKDEFNPPI 593

  Fly   608 LRPC-SYGKGQQWLMESKFKW 627
            ::.| |....|.|.: ::..|
 Worm   594 VQKCRSSNDRQNWTI-TEMSW 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 175/302 (58%)
Ricin_B_lectin 503..619 CDD:395527 33/148 (22%)
gly-6NP_001022644.1 WcaA 155..451 CDD:223539 170/295 (58%)
pp-GalNAc-T 160..463 CDD:133004 175/302 (58%)
Ricin_B_lectin 474..606 CDD:279046 33/150 (22%)
RICIN 476..608 CDD:238092 34/150 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194016at33208
OrthoFinder 1 1.000 - - FOG0002015
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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