DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt8b.2

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_021331087.1 Gene:galnt8b.2 / 100535692 ZFINID:ZDB-GENE-041210-84 Length:629 Species:Danio rerio


Alignment Length:634 Identity:191/634 - (30%)
Similarity:293/634 - (46%) Gaps:153/634 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VDDNQLVDDNEINTEKSLDGESGGALIMGQGFASGGISMTYP-SVVLKKWFLAPSVQEAKGKPGE 131
            |::.:|...||....|.|                      :| |.:.|:|               
Zfish    64 VEETRLNVKNEKKPAKKL----------------------FPDSYLFKRW--------------- 91

  Fly   132 MGKPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVRHEGCRRKHYASKLPTTSIVIVFH 196
               .|::..|.:...::.|::..:|...||.:.|:|.|.|.|...|..:.|...|||.|:|:::.
Zfish    92 ---SVELSEDEQRKAEDLFQKYGYNAFLSDRLPLDRELPDTRDHRCAEREYPPDLPTVSVVLIYL 153

  Fly   197 NEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAKLPVK-----TFVLRTEK 256
            :||.:.:.|.|:|:|||:|..||||||||||.|..:.|..||..|::.:..|     ..|...|:
Zfish   154 DEALSVIQRAVYSIINRTPAHLLKEIILVDDHSTNEDLQTQLHVYISSINEKHPGLVKMVTHAEQ 218

  Fly   257 RSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDETFE--- 318
            : ||.:||:.|.:..||:|:..||||.|....|.|||||||..:|..|:.|:.|.|:.:..|   
Zfish   219 K-GLSQARISGWKAASGDVVAILDAHIEVHVKWAEPLLARIQADRTLVLSPVFDKINYDDLEVTK 282

  Fly   319 YITASDSTWGGFNWKL-----NF--RWYRVPSREMARRNNDRTAPLRTPTMAGGLFSIDKDYFYE 376
            ||.::.    ||:|.|     .|  :||         ..||.:.|.::|::. |:..:|:.:|.|
Zfish   283 YIASAH----GFDWALWCMYVTFPEKWY---------NQNDPSLPGKSPSVM-GILVVDRLFFGE 333

  Fly   377 IGSYDEGMDIWGGENLEMSFR----------------------------------VWMCGGVLEI 407
            ||:.||||.::||||:|:..|                                  ||:|||.:|:
Zfish   334 IGTLDEGMQVYGGENVELGIRVIHHHTEAFIILLYLHVEQWCCCSLLTLGCVLAQVWLCGGSIEV 398

  Fly   408 APCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLVEVWLDDWKEFYYSFY--PGARKA-SAGDVSD 469
            .|||::.|:.|...|| .| ..:.::..|..|:.|||:|::|:..|..:  |..... ..||:|:
Zfish   399 VPCSKIAHIERAHKPY-MP-DLSNVMKRNALRVAEVWMDEYKKNVYMAWGLPMQNHGIDIGDLSE 461

  Fly   470 RKALRDRLKCKSFRWYLENVYPESLMPLD--YYYLGEIRNAETETCLDTMGRKYNEKVGISYCHG 532
            ||.||:||.||.|:||||||| ..|.|:|  ..|...|.:.:|..|||....:.|..: :..||.
Zfish   462 RKKLRERLNCKRFKWYLENVY-NLLNPMDDLLGYGSLINDLQTSLCLDKGPSEENTPI-LYPCHF 524

  Fly   533 LGGNQVFAYTKRQQIM---------SDDLCL-DASSSNGPVNMVRCHNMGGNQEWVYDAEEK--- 584
            |...|.| ||...:|:         |.:.|| |..|...|           ...|..|.|:.   
Zfish   525 LISQQFF-YTTSGEILVGPLQPLLHSRNRCLADPGSGRFP-----------EFSWCSDTEKPKHM 577

  Fly   585 -W-------IRHTNTGQCLQRATR---DDANTPLLRPCSYGKGQQWLME 622
             |       |::.:|.:||:.:|:   |..|...::.|   :.|.|.::
Zfish   578 YWDFKQGQAIQNRDTKRCLEISTKQTGDYKNNVFIQQC---RNQHWRIQ 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 125/351 (36%)
Ricin_B_lectin 503..619 CDD:395527 33/139 (24%)
galnt8b.2XP_021331087.1 pp-GalNAc-T 147..482 CDD:133004 125/351 (36%)
Ricin_B_lectin 494..620 CDD:306998 34/141 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586998
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.