DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt9

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002931923.1 Gene:galnt9 / 100490061 XenbaseID:XB-GENE-948907 Length:604 Species:Xenopus tropicalis


Alignment Length:532 Identity:194/532 - (36%)
Similarity:291/532 - (54%) Gaps:52/532 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 PGEMGKPVKIPADMKDLMKE---KFKENQFNLLASDMISLNRSLTDVRHEGCRRKHYASKLPTTS 190
            ||.:|:. .:.|.::|...|   |::|..:|...||.|||:||:.|.|.:.|::..|...||..:
 Frog    92 PGGLGQG-GMAATLRDDSHESETKYEEYGYNAQLSDRISLDRSIPDYRPKKCKQMTYPDDLPQIA 155

  Fly   191 IVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAK-LPVKTFVLRT 254
            :|.:|.|||.:.:||:|.||:|.:|..||||||||||.|:...|...|::||.| .|....::|.
 Frog   156 VVFIFVNEALSVILRSVHSVVNHTPSYLLKEIILVDDNSDNVELKFNLDQYVNKRYPGLVKIVRN 220

  Fly   255 EKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDETFE- 318
            .:|.||||||:.|.:..|..::.|.|||.|...||.||::.||.::||.::.|.||.|...:|| 
 Frog   221 TRREGLIRARIQGWKAASAPIVGFFDAHVEFNTGWAEPVITRIKEDRRRIILPAIDNIKYNSFEV 285

  Fly   319 --YITASDSTWGGFNWKLNFRW--YRVPSREMARRNNDRTAPLRTPTMAGGLFSIDKDYFYEIGS 379
              |..|:.    |:||.|   |  |..|.::...: .|.:||:|||.|.|..|.:|:.||.:||.
 Frog   286 QQYANAAH----GYNWGL---WCMYITPPQDWLEK-GDESAPIRTPAMIGCSFVVDRAYFGDIGL 342

  Fly   380 YDEGMDIWGGENLEMSFRVWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLVEVW 444
            .|.||:::||||:|:..|||.|||.:|:.|||||.|:.|...||.  .........|..|..|||
 Frog   343 LDPGMEVYGGENIELGMRVWQCGGSMEVLPCSRVAHIERTKKPYN--NDIDYYAKRNALRAAEVW 405

  Fly   445 LDDWKEFYYSFY------PGARKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLDYYYLG 503
            :|::|...|..:      ||   ...||||:|.|||.:|:|:||:|||||||||..:..:....|
 Frog   406 MDEFKSHVYMAWNIPMTNPG---VDFGDVSERVALRQKLQCRSFKWYLENVYPEMRVYNNTITYG 467

  Fly   504 EIRNAE-TETCLDTMGRKYNEKVGISYCHGLGGNQVFAYTKR----------QQIMSDDLCLDAS 557
            |:||:: |..||| .|.:.:.|..:..|||: .:|:..|:..          ...:.|..||...
 Frog   468 ELRNSKATGYCLD-QGSEDDNKAILYPCHGM-SSQLVRYSSEGLLQLGPLGSTSFLPDTKCLIDD 530

  Fly   558 SSNGPVNMVRCHNMGGNQEWVYD-AEEKWIRHTNTGQCLQRATRDDANTPL---LRPCSYGKGQQ 618
            .......:.:|.::..:.:.::| .:...|.:.:||:||:.....|||..|   ::.||   ||:
 Frog   531 GKGRTPTLKKCDDVPRSPQKLWDFTQSSPIVNRDTGRCLEVEMSKDANFGLRLVVQRCS---GQK 592

  Fly   619 WLMESKFKWQAH 630
            |::.:   |..|
 Frog   593 WIIRN---WIKH 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 132/311 (42%)
Ricin_B_lectin 503..619 CDD:395527 33/130 (25%)
galnt9XP_002931923.1 pp-GalNAc-T 156..454 CDD:133004 132/310 (43%)
Ricin_B_lectin 465..593 CDD:366226 33/132 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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