DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt5

DIOPT Version :9

Sequence 1:NP_001036338.1 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_002667267.4 Gene:galnt5 / 100334784 -ID:- Length:768 Species:Danio rerio


Alignment Length:513 Identity:177/513 - (34%)
Similarity:266/513 - (51%) Gaps:58/513 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 GEMGKPVKIPADMKDLMKEKFKENQFNLLASDMISLNRSLTDVRHEGCRRKHYASKLPTTSIVIV 194
            |:.|:|.::|.:.:...:.::.|..||:..|:.|.::|::.|.|.:.|........||:||::..
Zfish   284 GQFGQPARVPKNEELESRRRWSEGFFNVFLSEQIPIDRAIPDTRPQTCSESLVHDDLPSTSVIFC 348

  Fly   195 FHNEAWTTLLRTVWSVINRSPRALLKEIILVDDASERDFLGKQLEEYVAKLPVKTFVLRTEKRSG 259
            |.:|.|:||||:|.||:||||..||||||||||.|.:|:|.:||:.|:::.| |..::..::|.|
Zfish   349 FVDEVWSTLLRSVHSVLNRSPPQLLKEIILVDDCSTKDYLKEQLDVYMSQFP-KVRIIHLKERQG 412

  Fly   260 LIRARLLGAEHVSGEVITFLDAHCECTEGWLEPLLARIVQNRRTVVCPIIDVISDETFEYITASD 324
            |||||:.||...:|||:||||:|.||..|||||||.||..:||.|.||:||||:|:...|:...:
Zfish   413 LIRARMAGAAAATGEVLTFLDSHIECNVGWLEPLLERIYLDRRKVPCPVIDVINDKDMSYMLVDN 477

  Fly   325 STWGGFNWKLNFRWYRVPSREMARRNNDRTAPLR-------------TPTMAGGLFSIDKDYFYE 376
            ...|.|.|.|.|.|..:|...:.:.....:.|:|             ....:|.:|.        
Zfish   478 FQRGIFKWPLVFGWSALPEEYIQKNQIKDSDPIRIACCFIHSHILHNNRKKSGNVFL-------- 534

  Fly   377 IGSYDEGMDIWGGENLEMSFRVWMCGGVLEIAPCSRVGHVFRKSTPYTFPGGTTEIVNHNNARLV 441
                             ..|::|||||.:||.|||||||:||...||.|.....:.|..|.||:.
Zfish   535 -----------------FVFQIWMCGGEIEIIPCSRVGHIFRSDNPYKFTKDRVKTVERNLARVA 582

  Fly   442 EVWLDDWKE-FY---YSFYPGARKASAGDVSDRKALRDRLKCKSFRWYLENVYPESLMPLDYYYL 502
            |||||::|| ||   |...........|:::::..||::||||||:||||||||:...|: ....
Zfish   583 EVWLDEYKEVFYGHGYQHLLDKNVTDIGNLTEQIQLREKLKCKSFKWYLENVYPDLDTPV-VKAE 646

  Fly   503 GEIRNAETETCLDTMGRKYNEKVGISYCHGLGGNQVFAYTKRQQIMSDDLCLDASSSNGPVNMVR 567
            |.|.|..|..||...    ||...::.|.....:|.|.:|..:.:..:..||....:.  :.|..
Zfish   647 GLIFNVGTRKCLIFQ----NESFSLTKCDLTNKSQYFTFTWLRLLRQNTSCLAPQETQ--LTMEP 705

  Fly   568 CHNMGGNQEWVYDAEEKWIRHT-----NTGQCLQRATRDDANTPLLRPCS-YGKGQQW 619
            |.|...:..|::.:.:....|.     :...||:...:.|.  ..|:.|. :...|:|
Zfish   706 CDNTKPHLRWIHKSGKALTEHLMAEVYSQPICLEAGIKADG--VFLKGCDRFSTFQKW 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_001036338.1 pp-GalNAc-T 190..490 CDD:133004 131/316 (41%)
Ricin_B_lectin 503..619 CDD:395527 25/121 (21%)
galnt5XP_002667267.4 Glyco_tranf_GTA_type 344..635 CDD:325014 131/316 (41%)
Ricin_B_lectin 647..761 CDD:306998 25/121 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D194016at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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