DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant5 and galnt3

DIOPT Version :10

Sequence 1:NP_608906.2 Gene:Pgant5 / 326151 FlyBaseID:FBgn0031681 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_021334717.1 Gene:galnt3 / 100331984 ZFINID:ZDB-GENE-120313-1 Length:625 Species:Danio rerio


Alignment Length:673 Identity:277/673 - (41%)
Similarity:367/673 - (54%) Gaps:108/673 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TFTRKMRGRMRSNTCRIVLLTSLVWVIFDFVLIARYSDCIGKDGWRCKRSGEYDVELPNAERLVD 69
            ||.|::. |.|.:..::.:: :||:|.|.|::                            :|.|.
Zfish     2 TFIRRLL-RRRLHPLKLAIV-ALVFVTFLFLM----------------------------QREVV 36

  Fly    70 DNQLVDDNEIN--TEKSLDGESGGALIMGQGFASGGISMTYPSVVLKKWFLAP-SVQEAKGK--- 128
            .....|:..:.  .||. ||..|  ::||   |........|.:.:|    || ..||::|.   
Zfish    37 SQSPQDEPWLRGIVEKR-DGVLG--MVMG---AVNNFRDAMPKMQIK----APVRQQESQGSSAC 91

  Fly   129 -----------------------PGEMGKPVKI----PADMKDLMKEKFKENQ-FNLLASDMISL 165
                                   ||..||....    .::.|:  ||:.:|.. |||.|||.|||
Zfish    92 LSGYYTPAELKPVLERPPQNPSAPGASGKAFHTDNLSSSEQKE--KERGEEKHCFNLYASDRISL 154

  Fly   166 NRSL-TDVRHEGCRRKHY--ASKLPTTSIVIVFHNEAWTTLLRTVWSVINRSPRALLKEIILVDD 227
            :|.| .|.|...|..:.:  ...|||||::||||||||:||||||:||::.||...|||||||||
Zfish   155 SRDLGPDTRPPECIEQTFRRCPPLPTTSVIIVFHNEAWSTLLRTVYSVLHTSPALFLKEIILVDD 219

  Fly   228 ASERDFLGKQLEEYVAKLPVKTFVLRTEKRSGLIRARLLGAEHVSGEVITFLDAHCECTEGWLEP 292
            ||..:.|..:|:|::.:|.: ..|:|..:|.|||.||||||...:|:.:|||||||||..|||||
Zfish   220 ASVDEHLKDKLDEFLKQLHI-VRVVRQHERKGLITARLLGASVATGDTLTFLDAHCECFHGWLEP 283

  Fly   293 LLARIVQNRRTVVCPIIDVISDETFEYITAS----DSTWGGFNWKLNFRWYRVPSREMARRNNDR 353
            |||||.:|...||.|.|..|...|||::..|    ....|.|:|.|:|.|..:|..| .||..|.
Zfish   284 LLARIAENSSAVVSPDITTIDLNTFEFMKPSPYGQHHNRGNFDWGLSFGWETLPDHE-RRRRKDE 347

  Fly   354 TAPLRTPTMAGGLFSIDKDYFYEIGSYDEGMDIWGGENLEMSFRIWQCGGILEIIPCSHVGHVFR 418
            |.|::|||.|||||||.:||||.||||||.|:||||||:|||||:|||||.|||||||.||||||
Zfish   348 TYPIKTPTFAGGLFSISRDYFYHIGSYDEEMEIWGGENIEMSFRVWQCGGQLEIIPCSVVGHVFR 412

  Fly   419 DKSPYTFPGGVAKIVLHNAARVAEVWLDEWRDFYYSMSTG----ARKASAGDVSDRKALRDRLKC 479
            .|||:|||.| .:::..|..|:||||:|::::.:|..:..    |::.|.||||.|..||:||:|
Zfish   413 TKSPHTFPKG-TQVIARNQVRLAEVWMDDYKEIFYRRNQQAAQIAKEHSFGDVSRRVDLRERLQC 476

  Fly   480 KSFRWYLENVYPESLMP-LDYYYLGEIRNAETETCLDTMGRKYNEKVGISY-CHGLGGNQVFAYT 542
            |||.|||:|||||..|| |:....|.|||...|.|||........|..|.| |||:||||.|.|:
Zfish   477 KSFSWYLKNVYPEVFMPDLNPLQFGAIRNMGKEACLDVGESNEGGKPLIMYPCHGMGGNQYFEYS 541

  Fly   543 KRQQI---MSDDLCLDASSSNGPVNMVRCHNMGGN------QEWVYDAEEKWIRHTNTGQCLQRA 598
            ...:|   :..:|||| .:....|.:..|...|.|      |:|.. .|::...:..:.|||...
Zfish   542 THHEIRHNIQKELCLD-GTDGAMVRLEECQYKGHNTITSPQQKWEL-REDQLFYNKASKQCLSAR 604

  Fly   599 TRDDANTPLLRPCS-YGKGQQWL 620
            ..:    |.|.||: ..|.|.||
Zfish   605 PEN----PSLVPCNPDDKYQLWL 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant5NP_608906.2 pp-GalNAc-T 190..490 CDD:133004 173/307 (56%)
beta-trefoil_Ricin_GALNT1-like 497..623 CDD:467311 44/135 (33%)
galnt3XP_021334717.1 pp-GalNAc-T 182..487 CDD:133004 173/307 (56%)
beta-trefoil_Ricin_GALNT3 496..625 CDD:467346 43/134 (32%)

Return to query results.
Submit another query.