DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31650 and rcn1

DIOPT Version :9

Sequence 1:NP_001162879.1 Gene:CG31650 / 326150 FlyBaseID:FBgn0031673 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001016768.1 Gene:rcn1 / 549522 XenbaseID:XB-GENE-490301 Length:321 Species:Xenopus tropicalis


Alignment Length:350 Identity:117/350 - (33%)
Similarity:177/350 - (50%) Gaps:40/350 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PRNLPLLPLTLCAVALLAAVGPMPAHGAVANSHKHEKHLSKERVKDGIYAPRDAHHHGEDGEHNV 66
            |.::..|.|.||...:|.                 :....|||::      .|...:.:..|.|.
 Frog     3 PHSVLCLLLVLCTGEVLC-----------------KPTFRKERIR------LDPELNNQIPEENQ 44

  Fly    67 EF--DHEAIIGNTKEAQEFDSLSPDESKRRLLILIKMMDLNKDEFIDRHELKAWILRSFKKLSEE 129
            .|  ||||.:|. .:|:.||.|:|:|||.||..:|..:|.:.|..|...||.|||.|..|:...|
 Frog    45 SFQQDHEAFLGK-DDAKTFDQLTPEESKDRLGKIINRIDSDSDGLITTEELTAWIKRVQKRYVYE 108

  Fly   130 EAADRFEEIDQDADERITWKEYLQDTYA---MEDEDFKKETIDYDSYEDEQKMIKQDKEMFNAAD 191
            ..|..:::.|.:.|..|:|:||.|.||.   ...|:| ::..:..|:   :||:.:|:..|..||
 Frog   109 NVARVWKDYDVNKDNTISWEEYKQATYGYYLANPEEF-QDAAEQFSF---KKMLPRDERRFKQAD 169

  Fly   192 TNKDGVLTLEEFVLFQNPEEHPQMLPILLEHTMQDKDADHDGKINFQEFVGDAASHH----DKEW 252
            .|.|.....|||..|.:|||...|..|::..|::|.|.:.||.::..|::.|..||.    :.:|
 Frog   170 LNGDLEANREEFTSFLHPEEFEHMKDIVILETLEDIDKNGDGFVDQDEYIADMFSHEEGQPEPDW 234

  Fly   253 LITEKERFDKDHDSNGDGVLTGDEVLSWIVPSNTAIANDEVDHLFVSTDEDHDDRLSYLEILNNY 317
            :.||:|:|....|.|.||.:..:|:..||:|.:...|..|..||...:|.|.|..|:..|:|.|:
 Frog   235 VATEREQFADFRDINKDGKMDKEEIRHWILPQDYDHAQAEARHLIYESDLDKDKVLTKEEVLQNW 299

  Fly   318 DTFVGSEATDYGDHLQNINHLSDEL 342
            :.||||:||:||:.|.. ||  |||
 Frog   300 NMFVGSQATNYGEDLTR-NH--DEL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31650NP_001162879.1 EF-hand_7 100..153 CDD:290234 18/52 (35%)
EFh 100..153 CDD:298682 18/52 (35%)
EF-hand_7 184..241 CDD:290234 20/56 (36%)
EFh 184..241 CDD:298682 20/56 (36%)
EFh 228..281 CDD:298682 17/56 (30%)
rcn1NP_001016768.1 FRQ1 58..224 CDD:227455 59/169 (35%)
EFh 76..133 CDD:298682 19/56 (34%)
FRQ1 153..299 CDD:227455 50/148 (34%)
EFh 198..263 CDD:238008 19/64 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D372250at33208
OrthoFinder 1 1.000 - - FOG0000638
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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