DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31650 and Rcn1

DIOPT Version :9

Sequence 1:NP_001162879.1 Gene:CG31650 / 326150 FlyBaseID:FBgn0031673 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001102056.1 Gene:Rcn1 / 362182 RGDID:1311292 Length:325 Species:Rattus norvegicus


Alignment Length:338 Identity:116/338 - (34%)
Similarity:187/338 - (55%) Gaps:37/338 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VALLAAVGPMPAHGAVANSHKHEKHLSKERVKDGIYAPRDAHHHGE---DGEHNVEFDHEAIIGN 76
            :||:.|:...|.             :.||||      .|.....||   :...:.::||||.:|.
  Rat    15 LALVLALRAKPT-------------VRKERV------VRPDSELGERPPEDNQSFQYDHEAFLGK 60

  Fly    77 TKEAQEFDSLSPDESKRRLLILIKMMDLNKDEFIDRHELKAWILRSFKKLSEEEAADRFEEIDQD 141
             ::::.||.|||||||.||..::..:|.:.|..:...|||.||.|..|:...:..|..:::.|:|
  Rat    61 -EDSKTFDQLSPDESKERLGKIVDRIDSDGDGLVTTEELKVWIKRVQKRYIYDNVAKVWKDYDRD 124

  Fly   142 ADERITWKEYLQDTYAM---EDEDFKKETIDYDSYEDEQKMIKQDKEMFNAADTNKDGVLTLEEF 203
            .||:|:|:||.|.||..   ...:| :::.|:.::   :||:.:|:..|.|:|.:.|...|.|||
  Rat   125 KDEKISWEEYKQATYGYYLGNPAEF-QDSSDHHTF---KKMLPRDERRFKASDLDGDLTATREEF 185

  Fly   204 VLFQNPEEHPQMLPILLEHTMQDKDADHDGKINFQEFVGDAASHHDK----EWLITEKERFDKDH 264
            ..|.:|||...|..|::..|::|.|.:.||.::..|::.|..||.|.    :|:::|:|:|:...
  Rat   186 TAFLHPEEFEHMKEIVVLETLEDIDKNGDGFVDQDEYIADMFSHEDNGPEPDWVLSEREQFNDFR 250

  Fly   265 DSNGDGVLTGDEVLSWIVPSNTAIANDEVDHLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYG 329
            |.|.||.|..||:..||:|.:...|..|..||...:|::.|:.|:..|||:|::.||||:||:||
  Rat   251 DLNKDGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEMLTKEEILDNWNMFVGSQATNYG 315

  Fly   330 DHLQNINHLSDEL 342
            :.|.. ||  |||
  Rat   316 EDLTK-NH--DEL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31650NP_001162879.1 EF-hand_7 100..153 CDD:290234 18/52 (35%)
EFh 100..153 CDD:298682 18/52 (35%)
EF-hand_7 184..241 CDD:290234 20/56 (36%)
EFh 184..241 CDD:298682 20/56 (36%)
EFh 228..281 CDD:298682 19/56 (34%)
Rcn1NP_001102056.1 EFh_CREC_RCN1 42..308 CDD:320027 92/270 (34%)
EF-hand motif 42..71 CDD:320027 8/29 (28%)
EF-hand motif 77..106 CDD:320027 10/28 (36%)
EF-hand motif 113..142 CDD:320027 12/28 (43%)
EF-hand motif 164..193 CDD:320027 11/28 (39%)
EF-hand motif 201..230 CDD:320027 8/28 (29%)
EF-hand motif 242..271 CDD:320027 13/28 (46%)
EF-hand motif 278..308 CDD:320027 11/29 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4223
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D372250at33208
OrthoFinder 1 1.000 - - FOG0000638
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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