DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc50 and YNR048W

DIOPT Version :10

Sequence 1:NP_573128.2 Gene:Cdc50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_014446.3 Gene:YNR048W / 855784 SGDID:S000005331 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:354 Identity:127/354 - (35%)
Similarity:184/354 - (51%) Gaps:48/354 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELIIDYTKCR 77
            |.||::|::::|:||||.||||:|:.::|||...::..:|.|||:.|:..:.:...|:::||:|.
Yeast    19 AQKSRKPANTSFRQQRLKAWQPILSPQSVLPLLILMACVFAPIGIGLVVSTISVQRLVVNYTECD 83

  Fly    78 RSGG----NTTCAEYLE--------ANPG---VTCP------CEVPFVLPSDFNGVVYMYYGLTN 121
            ....    .|..:||::        ..|.   :|.|      |.:.|.:|:......|:||.|||
Yeast    84 ALAPAKHFETIPSEYVDYHFSKKVAVQPQWMVLTDPELGNQTCRIQFEVPNHIKKSTYVYYRLTN 148

  Fly   122 YYQNHRRYVKSRDDEQLLGH--LSQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFND----TLTL 180
            :.||:|.||:|.|.:||.|.  :......:|.|..  ....|.|.|||.||||:|||    |||.
Yeast   149 FNQNYREYVQSLDLDQLKGKALIGNDLDPNCDPLR--TVENKTIFPCGLIANSMFNDTFGTTLTG 211

  Fly   181 LQGGSEIKLLKTGIAWPSDKRVKFRNPEGNLNVSLEGFSKPIFWQKGLAD--LDPENPDNNGFQN 243
            :...::..|...||||.:|.     :..|....:......|..|.|...:  .|...||   .||
Yeast   212 VNDTADYLLTTKGIAWDTDS-----HRYGKTEYNASDIVPPPNWAKLFPNGYTDDNIPD---LQN 268

  Fly   244 -EDLIVWMRTAALPSFRKLYRRLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSV 307
             |...:||||||||:|.||..:      |..|||..|.|..:|:.||||.||.|||..:|:|.|:
Yeast   269 WEQFKIWMRTAALPNFYKLAMK------NETNGLGKGIYIADIELNYPVRSFYGTKSFVLTTNSI 327

  Fly   308 LGGKNPFLGIAYIVVGAICITLGLALLFI 336
            :|..|..|||.|::|..|. || .|:||:
Yeast   328 IGAGNEALGIVYLIVAGIA-TL-FAILFL 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc50NP_573128.2 CDC50 59..343 CDD:460906 106/308 (34%)
YNR048WNP_014446.3 CDC50 3..375 CDD:227368 127/354 (36%)

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