DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc50 and ALIS5

DIOPT Version :10

Sequence 1:NP_573128.2 Gene:Cdc50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_565210.1 Gene:ALIS5 / 844283 AraportID:AT1G79450 Length:350 Species:Arabidopsis thaliana


Alignment Length:336 Identity:138/336 - (41%)
Similarity:189/336 - (56%) Gaps:28/336 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NEESAAAK-SKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELII 71
            :|.|...| ||||..|.|.||.|||.:|:||.|.|:.||.|.||:|||:||:.|..|....|::.
plant    16 SEISGVKKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVD 80

  Fly    72 DY-TKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDD 135
            .| |.|..:........|::......|...:  .:.......||:||.|.|:|||||||||||:|
plant    81 RYDTDCIPTSSRNNMVAYIQGEGDKICKRTI--TVTKAMKHPVYVYYQLENFYQNHRRYVKSRND 143

  Fly   136 EQLLGHLSQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLLQGGSEIKLLKTGIAWPSDK 200
            .||.....:.....|||  .|...|:||.|||.:|.||||||.:..:...::.:.|.||:|.||:
plant   144 AQLRSPKEEHDVKTCAP--EDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDR 206

  Fly   201 RVKFRNPEGNLNVSLEGFSK--PIFWQKGLADLDPENPDNNGFQNEDLIVWMRTAALPSFRKLYR 263
            ..||     ..||..:.|.|  ||    |...|:...|.:   :.|||||||||||||:|||||.
plant   207 ENKF-----GKNVFPKNFQKGAPI----GGGTLNISKPLS---EQEDLIVWMRTAALPTFRKLYG 259

  Fly   264 RLNQTNTNYANGLKSGN-YTLNIKYNYPVVSFDGTKRMILSTTSVLGGKNPFLGIAYIVVGAICI 327
            ::.       ..|.:|: .|:.::.||...||:|.|:::|||||.|||:|.||||||:.||:||:
plant   260 KIE-------TDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICL 317

  Fly   328 TLGLALLFIHM 338
            .|.:....:::
plant   318 FLAVTFAVLYL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc50NP_573128.2 CDC50 59..343 CDD:460906 109/284 (38%)
ALIS5NP_565210.1 CDC50 68..332 CDD:460906 109/284 (38%)

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