DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC50 and ALIS5

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_565210.1 Gene:ALIS5 / 844283 AraportID:AT1G79450 Length:350 Species:Arabidopsis thaliana


Alignment Length:336 Identity:138/336 - (41%)
Similarity:189/336 - (56%) Gaps:28/336 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NEESAAAK-SKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELII 71
            :|.|...| ||||..|.|.||.|||.:|:||.|.|:.||.|.||:|||:||:.|..|....|::.
plant    16 SEISGVKKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVD 80

  Fly    72 DY-TKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDD 135
            .| |.|..:........|::......|...:  .:.......||:||.|.|:|||||||||||:|
plant    81 RYDTDCIPTSSRNNMVAYIQGEGDKICKRTI--TVTKAMKHPVYVYYQLENFYQNHRRYVKSRND 143

  Fly   136 EQLLGHLSQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLLQGGSEIKLLKTGIAWPSDK 200
            .||.....:.....|||  .|...|:||.|||.:|.||||||.:..:...::.:.|.||:|.||:
plant   144 AQLRSPKEEHDVKTCAP--EDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDR 206

  Fly   201 RVKFRNPEGNLNVSLEGFSK--PIFWQKGLADLDPENPDNNGFQNEDLIVWMRTAALPSFRKLYR 263
            ..||     ..||..:.|.|  ||    |...|:...|.:   :.|||||||||||||:|||||.
plant   207 ENKF-----GKNVFPKNFQKGAPI----GGGTLNISKPLS---EQEDLIVWMRTAALPTFRKLYG 259

  Fly   264 RLNQTNTNYANGLKSGN-YTLNIKYNYPVVSFDGTKRMILSTTSVLGGKNPFLGIAYIVVGAICI 327
            ::.       ..|.:|: .|:.::.||...||:|.|:::|||||.|||:|.||||||:.||:||:
plant   260 KIE-------TDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICL 317

  Fly   328 TLGLALLFIHM 338
            .|.:....:::
plant   318 FLAVTFAVLYL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 107/276 (39%)
ALIS5NP_565210.1 CDC50 70..329 CDD:397450 108/282 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 185 1.000 Domainoid score I995
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110703
Inparanoid 1 1.050 232 1.000 Inparanoid score I1130
OMA 1 1.010 - - QHG53602
OrthoDB 1 1.010 - - D889671at2759
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm2961
orthoMCL 1 0.900 - - OOG6_100927
Panther 1 1.100 - - O PTHR10926
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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