DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC50 and AT5G46150

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_568657.1 Gene:AT5G46150 / 834657 AraportID:AT5G46150 Length:343 Species:Arabidopsis thaliana


Alignment Length:360 Identity:134/360 - (37%)
Similarity:191/360 - (53%) Gaps:56/360 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STQQAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTA 66
            |..:|.::.|.....:..:...||||:|||.:||||..:|:..|.::|.:|||||::.|..|..|
plant     7 SMNRAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDA 71

  Fly    67 NELIIDY-TKCRRSGGNT-------------TCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYY 117
            .|:|..| .:|......|             .|..||:....:..|              :::||
plant    72 IEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAP--------------IFIYY 122

  Fly   118 GLTNYYQNHRRYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLLQ 182
            .|.|||||||||||||.|:|||..|..:.::.|.|  .:..:|.||.|||.||.|:||||.|..:
plant   123 QLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEP--EESSNGLPIVPCGLIAWSMFNDTFTFSR 185

  Fly   183 GGSEIKLLKTGIAWPSDKRVKFRNPEGNLNVSLEGFSKPIFWQKGL----ADLDPENPDNNGFQN 243
            ..:::.:.:..|||.||:..||     ..||      .||.:|.|.    |.|||:.|.::   .
plant   186 ERTKLNVSRNNIAWKSDREHKF-----GKNV------YPINFQNGTLIGGAKLDPKIPLSD---Q 236

  Fly   244 EDLIVWMRTAALPSFRKLYRRLNQTNTNYANGLKSGNYT-LNIKYNYPVVSFDGTKRMILSTTSV 307
            ||.|||||.|||.||||||.|:.:       .|:.|... :|:..||...||.|.|::||||::.
plant   237 EDFIVWMRAAALLSFRKLYGRIEE-------DLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNW 294

  Fly   308 LGGKNPFLGIAYIVVGAICITLGLALLFIHMRCSR 342
            |||:|.||||.|:|||:..|.:.:..:.:|::..|
plant   295 LGGRNDFLGITYLVVGSSSIVISIIFMLLHLKNPR 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 108/291 (37%)
AT5G46150NP_568657.1 CDC50 67..307 CDD:397450 104/276 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 185 1.000 Domainoid score I995
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 232 1.000 Inparanoid score I1130
OMA 1 1.010 - - QHG53602
OrthoDB 1 1.010 - - D889671at2759
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm2961
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10926
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.940

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