DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC50 and ALIS1

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_566435.1 Gene:ALIS1 / 820456 AraportID:AT3G12740 Length:350 Species:Arabidopsis thaliana


Alignment Length:350 Identity:144/350 - (41%)
Similarity:189/350 - (54%) Gaps:33/350 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTQQAENEESAAA----------KSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPI 55
            ||:....:..:|||          .||||..|.|.||.|||.:|:||...|:.||.:|.|:|||:
plant     1 MSSSNTPSSSAAAAGSIDSSAARRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPL 65

  Fly    56 GVVLLHLSNTANELIIDY-TKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGL 119
            ||:.|..|....|::..| :.|...........|::.....:|...:  ::|......:|:||.|
plant    66 GVISLFASQDVVEIVDRYDSACIPLSDRANKVAYIQGTGNKSCTRTL--IVPKRMKQPIYVYYQL 128

  Fly   120 TNYYQNHRRYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLLQGG 184
            .|:|||||||||||.|.||.....:.....|.|  .|...|:||.|||.||.||||||..|.:..
plant   129 ENFYQNHRRYVKSRSDSQLRSVKDENQIDACKP--EDDFGGQPIVPCGLIAWSLFNDTYVLSRNN 191

  Fly   185 SEIKLLKTGIAWPSDKRVKFRNPEGNLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVW 249
            ..:.:.|.||||.|||..||     ..||..:.|.|...  .|.|.|||..|.::   .||||||
plant   192 QGLTVNKKGIAWKSDKEHKF-----GKNVFPKNFQKGNL--TGGASLDPNKPLSD---QEDLIVW 246

  Fly   250 MRTAALPSFRKLYRRLNQTNTNYANGLKSG-NYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKNP 313
            |||||||:|||||.::.       :.|:.| |..:.::.||...||.|.|:::|||||.|||||.
plant   247 MRTAALPTFRKLYGKIE-------SDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKND 304

  Fly   314 FLGIAYIVVGAICITLGLALLFIHM 338
            ||||||:.||.||..|.||...:::
plant   305 FLGIAYLTVGGICFVLALAFTVMYL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 113/273 (41%)
ALIS1NP_566435.1 CDC50 71..330 CDD:397450 114/279 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 185 1.000 Domainoid score I995
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110703
Inparanoid 1 1.050 232 1.000 Inparanoid score I1130
OMA 1 1.010 - - QHG53602
OrthoDB 1 1.010 - - D889671at2759
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm2961
orthoMCL 1 0.900 - - OOG6_100927
Panther 1 1.100 - - O PTHR10926
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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