DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC50 and TMEM30A

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_060717.1 Gene:TMEM30A / 55754 HGNCID:16667 Length:361 Species:Homo sapiens


Alignment Length:348 Identity:193/348 - (55%)
Similarity:234/348 - (67%) Gaps:20/348 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELIIDYTKCRR 78
            ||::||.::||||||||||||:|||.||||.||:||::|||||:.:...||...|:.||||....
Human    23 AKTRRPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGTEP 87

  Fly    79 SGGNTTCAEYLEANPGVT-CPCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDDEQLLGHL 142
            |.....|     .:|.|| |.|.:.|.|...|.|.|:|||||:|:|||||||||||||.||.|..
Human    88 SSPCNKC-----LSPDVTPCFCTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDSQLNGDS 147

  Fly   143 SQ--TPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLLQGGSE-----IKLLKTGIAWPSDK 200
            |.  .||.:|.|:..:.|  ||||||||||||:|||||.|...|::     |.|.|.||||.:||
Human   148 SALLNPSKECEPYRRNED--KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDK 210

  Fly   201 RVKFRNPEG--NLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVWMRTAALPSFRKLYR 263
            .||||||.|  ||....:|.:||:.|.|.:..|| .:||||||.|||.||||||||||:||||||
Human   211 NVKFRNPPGGDNLEERFKGTTKPVNWLKPVYMLD-SDPDNNGFINEDFIVWMRTAALPTFRKLYR 274

  Fly   264 RLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKNPFLGIAYIVVGAICIT 328
            .:.:.:..:.. |.:|.|:||:.|||||..|||.|||||||.|.:||||||||||||.||:|...
Human   275 LIERKSDLHPT-LPAGRYSLNVTYNYPVHYFDGRKRMILSTISWMGGKNPFLGIAYIAVGSISFL 338

  Fly   329 LGLALLFI-HMRCSRSNMEMINV 350
            ||:.||.| |...:.||...|.:
Human   339 LGVVLLVINHKYRNSSNTADITI 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 156/283 (55%)
TMEM30ANP_060717.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 3/5 (60%)
CDC50 70..349 CDD:397450 157/287 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147988
Domainoid 1 1.000 277 1.000 Domainoid score I1736
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110703
Inparanoid 1 1.050 347 1.000 Inparanoid score I2309
Isobase 1 0.950 - 0 Normalized mean entropy S1172
OMA 1 1.010 - - QHG53602
OrthoDB 1 1.010 - - D461644at33208
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm42164
orthoMCL 1 0.900 - - OOG6_100927
Panther 1 1.100 - - LDO PTHR10926
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.720

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