DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDC50 and tmem30ab

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_991123.2 Gene:tmem30ab / 333952 ZFINID:ZDB-GENE-030131-5884 Length:368 Species:Danio rerio


Alignment Length:364 Identity:192/364 - (52%)
Similarity:237/364 - (65%) Gaps:26/364 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STQQAENEE----------SAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIG 56
            |:..|:.|:          ..|.::::|.::||||||||||||:|||.||||.|||||::|||||
Zfish     3 SSYNAKEEDGHHSGTAGLGGTAIRTRKPDNTAFKQQRLPAWQPILTAGTVLPAFFVIGLIFIPIG 67

  Fly    57 VVLLHLSNTANELIIDYTKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLTN 121
            :.|...||...|..||||....|.....|::....|....|.|.:.|.|...|...|:|||||:|
Zfish    68 IGLYVTSNNIKEFEIDYTGTDMSSPCFNCSQSFSWNSTTPCKCTLSFSLDQPFESNVFMYYGLSN 132

  Fly   122 YYQNHRRYVKSRDDEQLLG--HLSQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLL--- 181
            :|||||||||||||.||.|  ...:.||.:|.|  |..:..|.||||||||||:|||||.|.   
Zfish   133 FYQNHRRYVKSRDDSQLNGDERSLKEPSKECEP--YRTNDNKRIAPCGAIANSMFNDTLDLFYID 195

  Fly   182 QGG--SEIKLLKTGIAWPSDKRVKFRNPEGNLNVSLEGF----SKPIFWQKGLADLDPENPDNNG 240
            ..|  ::|.::|.||||.:||.||||||.|| |.:|...    :|||.|:|.:.:||.: |:|||
Zfish   196 PNGTKTQIPMIKKGIAWWTDKHVKFRNPGGN-NPNLTAVFIDTAKPINWRKPVYELDTD-PENNG 258

  Fly   241 FQNEDLIVWMRTAALPSFRKLYRRLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTT 305
            |.|||.||||||||||:||||||.:.:.| |....|..|||:|.:.|||||.||:|.|||||||.
Zfish   259 FINEDFIVWMRTAALPTFRKLYRIIQKKN-NMTPTLPRGNYSLEVTYNYPVRSFEGRKRMILSTI 322

  Fly   306 SVLGGKNPFLGIAYIVVGAICITLGLALLFIHMRCSRSN 344
            |.:||||||||||||.||:||..||:.|||||.:....|
Zfish   323 SWMGGKNPFLGIAYITVGSICFFLGVVLLFIHHKYGNRN 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 154/283 (54%)
tmem30abNP_991123.2 CDC50 77..357 CDD:281387 154/284 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581886
Domainoid 1 1.000 305 1.000 Domainoid score I1342
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 377 1.000 Inparanoid score I2045
OMA 1 1.010 - - QHG53602
OrthoDB 1 1.010 - - D461644at33208
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm24905
orthoMCL 1 0.900 - - OOG6_100927
Panther 1 1.100 - - O PTHR10926
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R781
SonicParanoid 1 1.000 - - X371
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.