Protein Alignment CDC50 and Tmem30c

DIOPT Version :9

• Sequence 1: NP_573128.2
• Gene: CDC50 / 32615
• FlyBaseID: FBgn0030752
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_001099359.1
• Gene: Tmem30c / 288175
• RGDID: 1306090
• Length: 342
• Species: Rattus norvegicus
• Alignment Length: 342
• Identity: 152/342 - (44%)
• Similarity: 210/342 - (61%)
• Gaps: 18/342 - (5%)

  Fly    16 SKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELIIDYTK-CRRS 79
            |:.|.::|.|||.|||.|..|:|..||..||..|...:.:||:||..:.:..|:.|:||. |
  Rat    10 SRLPENTALKQQTLPAQQLNLSASIVLSIFFATGGFCLSVGVILLLFAKSTKEIEINYTNMC--- 71

  Fly    80 GGNTTCAEYLE--ANPGVTCPCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDDEQLLGHL 142
               ..||:..|  :|....|.|.:|..||....|.|||||.|..:|||..||:.||.:.||:|.
  Rat    72 ---ANCAQLREDSSNFDKECNCSLPLYLPEKMEGDVYMYYKLYGFYQNLYRYILSRSNSQLVGK- 132

  Fly   143 SQTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTL---LQGGS--EIKLLKTGIAWPSDKRV 202
            ....:|:|:||....:. .||.||||||||:||||:||   |...:  |:.:|::|:.|.:||.|
  Rat   133 DIWDTTNCSPFQVSKND-TPIIPCGAIANSIFNDTITLSYNLNSSTQIEVPMLRSGLTWWTDKYV 196

  Fly   203 KFRNPE-GNLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVWMRTAALPSFRKLYRRLN 266
            |||||. .|...:..|.|||:.|.|.:.:||.|:|.||||.|||.||||||||.|:||||||||.
  Rat   197 KFRNPRTSNFTSTFAGSSKPLHWAKPVYELDLEDPGNNGFVNEDFIVWMRTAAFPTFRKLYRRLR 261

  Fly   267 QTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKNPFLGIAYIVVGAICITLGL 331
            :.: ::|:||.:|||:|:|.||:||..|.|.|.:||||.:..||...|||:.|.|.||:.:....
  Rat   262 RED-SFADGLPAGNYSLSISYNFPVTMFQGEKSVILSTLTWFGGGGLFLGLTYTVTGALTLLASF 325

  Fly   332 ALLFIHMRCSRSNMEMI 348
            |:|.:|::..|:.:..:
  Rat   326 AILAVHLKLKRNKLSFL 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CDC50	NP_573128.2	CDC50	67..340	CDD:281387	130/281 (46%)
Tmem30c	NP_001099359.1	CDC50	55..333	CDD:397450	130/286 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166341856
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53602
OrthoDB	1	1.010	-	-		D461644at33208
OrthoFinder	1	1.000	-	-		FOG0000577
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10926
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X371
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.960