DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC50 and ivn1

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_595627.1 Gene:ivn1 / 2539729 PomBaseID:SPBC11B10.07c Length:371 Species:Schizosaccharomyces pombe


Alignment Length:348 Identity:134/348 - (38%)
Similarity:178/348 - (51%) Gaps:48/348 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELIIDYTKCRRSGG 81
            |||..|.|.||.|||||.:.|..||||..|::|::|.|:|..:...|....||.||||.|...|.
pombe    16 KRPDKSRFVQQTLPAWQFIFTPWTVLPLLFLLGIVFAPLGAGMFVASRRVKELRIDYTDCMNIGD 80

  Fly    82 N-----TTCAEYLEAN-PGVTC-------PCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSR 133
            .     :|..|:...| ..||.       .|.:.|.:|.:....|:.:|.|.|:|||||||..|.
pombe    81 EFKQVPSTNIEFQYKNVKNVTAMWKSSGDVCTLRFQIPEEMTSPVFAFYRLKNFYQNHRRYTVSA 145

  Fly   134 DDEQLLGH---LSQTPSTD-CAPFAYDPDSGKPIAPCGAIANSLFNDTLTLL------QGGSEIK 188
            |..||||.   ::|..|.. |.|...: :.|||..|||.||||||||:.:.|      ...:.:.
pombe   146 DMFQLLGEARTVAQLKSYGFCKPLEAN-EEGKPYYPCGIIANSLFNDSYSSLLRYESFDSSNSLG 209

  Fly   189 LLK---TGIAWPSDKRVKFRNPEGNLNVSLEGFSKPIFWQK----GLADLD-PENPDNNGFQNED 245
            |..   .|.|||.| |.:::..:.|.:..:    .|..|.|    |..|.: |:....:.||   
pombe   210 LYNMTTNGTAWPED-RERYKKTKYNASQIV----PPPNWAKMFPNGYTDDNIPDVSTWDAFQ--- 266

  Fly   246 LIVWMRTAALPSFRKLYRRLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGG 310
              :|||.||||:|.||..|      |....|:.|.|.:||.||:||..:.|||.::.|||||:||
pombe   267 --IWMRAAALPTFSKLALR------NVTTALQPGIYEMNITYNFPVTEYKGTKTIMFSTTSVIGG 323

  Fly   311 KNPFLGIAYIVVGAICITLGLAL 333
            ||.||||.|.|:|.:|...|:.|
pombe   324 KNYFLGILYFVIGGLCAASGVIL 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 111/298 (37%)
ivn1NP_595627.1 CDC50 1..368 CDD:227368 134/348 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I881
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I898
OMA 1 1.010 - - QHG53602
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm47402
orthoMCL 1 0.900 - - OOG6_100927
Panther 1 1.100 - - O PTHR10926
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R781
SonicParanoid 1 1.000 - - X371
TreeFam 1 0.960 - -
1312.860

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