DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC50 and TMEM30B

DIOPT Version :9

Sequence 1:NP_573128.2 Gene:CDC50 / 32615 FlyBaseID:FBgn0030752 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001017970.1 Gene:TMEM30B / 161291 HGNCID:27254 Length:351 Species:Homo sapiens


Alignment Length:345 Identity:169/345 - (48%)
Similarity:223/345 - (64%) Gaps:23/345 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SAAAK-SKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELIIDYT 74
            ||.|: :.:|.::||.|||||||||:|:|...||.||..|:.||.:|:.|.:.||...||..|||
Human     4 SATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKELEYDYT 68

  Fly    75 KCRRSGGNTTCAEYLEANPG----VTCPCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDD 135
            ....:|..:.||   .|..|    ..|.|...|.||..|.|.||:||.|||:|||:|||..||||
Human    69 GDPGTGNCSVCA---AAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQNNRRYGVSRDD 130

  Fly   136 EQLLGHLS--QTPSTDCAPFAYDPDSGKPIAPCGAIANSLFNDTLTLLQ----GGS--EIKLLKT 192
            .||.|..|  :.|..:|||:.... :|.|||||||||||||||:.:|..    ||.  |:.|.::
Human   131 AQLSGLPSALRHPVNECAPYQRSA-AGLPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRS 194

  Fly   193 GIAWPSDKRVKFRNP---EGNLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVWMRTAA 254
            ||||.:|..||||||   .|:|.::.:|.:.|..|::.:.:|.|: |:|.||.|:|.:|||||||
Human   195 GIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPD-PNNTGFINQDFVVWMRTAA 258

  Fly   255 LPSFRKLYRRLNQTNTNYANGLKSGNYTLNIKYNYPVVSFDGTKRMILSTTSVLGGKNPFLGIAY 319
            ||:|||||.|:.|  .||:.||..|.|.:||.|||||.:|.|.|.:|.|:.|.:|||||||||||
Human   259 LPTFRKLYARIRQ--GNYSAGLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAY 321

  Fly   320 IVVGAICITLGLALLFIHMR 339
            :|||::||..|..:|.:::|
Human   322 LVVGSLCILTGFVMLVVYIR 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC50NP_573128.2 CDC50 67..340 CDD:281387 141/288 (49%)
TMEM30BNP_001017970.1 CDC50 55..340 CDD:397450 142/291 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147989
Domainoid 1 1.000 277 1.000 Domainoid score I1736
eggNOG 1 0.900 - - E1_COG5035
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53602
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000577
OrthoInspector 1 1.000 - - otm42164
orthoMCL 1 0.900 - - OOG6_100927
Panther 1 1.100 - - O PTHR10926
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.710

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