DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31642 and Stmn2

DIOPT Version :9

Sequence 1:NP_723159.1 Gene:CG31642 / 326149 FlyBaseID:FBgn0051642 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_445892.1 Gene:Stmn2 / 84510 RGDID:68947 Length:179 Species:Rattus norvegicus


Alignment Length:130 Identity:23/130 - (17%)
Similarity:47/130 - (36%) Gaps:50/130 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 PQPSSQTRSTRSRNLASVR-------------PVAGGNTRSEQRTEQVFDSALSLALMVVQLDNM 194
            |.|.|:.    .|.|||.:             ..|.|..:|::            |.::.||   
  Rat    61 PSPISEA----PRTLASPKKKDLSLEEIQKKLEAAEGRRKSQE------------AQVLKQL--- 106

  Fly   195 DSTAADFPERCYEILQQTETVLMQHRSSRVPDMEAIESFVRVIEDQVVTSMADRRQRLGASSSSL 259
                |:..|...|:||:.              :|...:|.::.|::::..|...::...|:.:::
  Rat   107 ----AEKREHEREVLQKA--------------LEENNNFSKMAEEKLILKMEQIKENREANLAAI 153

  Fly   260  259
              Rat   154  153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31642NP_723159.1 ZZ_PCMF_like 15..65 CDD:239078
Stmn2NP_445892.1 Membrane attachment. /evidence=ECO:0000255 1..26
Stathmin 39..174 CDD:395674 23/130 (18%)
Regulatory/phosphorylation domain. /evidence=ECO:0000255 39..96 9/38 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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