DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS18A and rps18

DIOPT Version :9

Sequence 1:NP_731252.1 Gene:mRpS18A / 326141 FlyBaseID:FBgn0051450 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_051081.1 Gene:rps18 / 844736 -ID:- Length:101 Species:Arabidopsis thaliana


Alignment Length:77 Identity:19/77 - (24%)
Similarity:38/77 - (49%) Gaps:12/77 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PECTLGLDIKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMPNLAP---- 128
            |....|..|.:.::.::|:::...|.:|.||:..:..:||:    |:|:|.|...:.:|.|    
plant    20 PPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQR----LITIAIKQARILSLLPFLNN 80

  Fly   129 ----EWSKRDPK 136
                |.|:..|:
plant    81 QKQFERSESTPR 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS18ANP_731252.1 Ribosomal_S18 74..123 CDD:376453 12/48 (25%)
rps18NP_051081.1 rps18 1..86 CDD:177016 16/69 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13479
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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