DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS18A and Mrps18c

DIOPT Version :10

Sequence 1:NP_731252.1 Gene:mRpS18A / 326141 FlyBaseID:FBgn0051450 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_081102.1 Gene:Mrps18c / 68735 MGIID:1915985 Length:143 Species:Mus musculus


Alignment Length:218 Identity:53/218 - (24%)
Similarity:75/218 - (34%) Gaps:72/218 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 EKAPPPPSQTPSTSGDLINLHSGDDDD------FSDDQSPSPFNGGSLTRSHTEHRPNRPPP-PK 513
            |..||||.       ||:     ||:|      |.|....:|             ..:|||| |:
Mouse     7 EDFPPPPP-------DLL-----DDEDEGERFEFDDSGDEAP-------------EADRPPPEPE 46

  Fly   514 FQSFRAACADTPKSRPISYNIAVGARPNESHS------VSQPPKGMTVSMEDIIAEAPVAPERKR 572
            ..|....|:.:.:..|::     .|.||..|:      :..||:....:      ..|:|....:
Mouse    47 GISVPPPCSSSVRDAPVN-----EASPNPEHTFNAEADLPPPPQDFPAN------NRPLAEALFK 100

  Fly   573 LSILSLTGPPRVVPTPTQ---------------PSTSQDVATVTDGGDNRTFVSVSGESSSSSPT 622
            .|.|    ||...|.||:               |:...||..:.|  :|:....|.......||.
Mouse   101 QSDL----PPLPPPPPTELCPGAAEGRKIDLNPPAEGTDVHRMQD--ENKGASVVCSSKPKVSPY 159

  Fly   623 TSISI-PSNVQ-PPPQSAKPKPP 643
            :.|.| |...| |..||..|..|
Mouse   160 SVIDIGPIQQQLPSEQSGPPSSP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS18ANP_731252.1 Ribosomal_S18 74..123 CDD:460054
Mrps18cNP_081102.1 Ribosomal_S18 73..121 CDD:460054 11/57 (19%)
Blue background indicates that the domain is not in the aligned region.

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