DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31441 and trem

DIOPT Version :9

Sequence 1:NP_731558.1 Gene:CG31441 / 326139 FlyBaseID:FBgn0051441 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_650861.1 Gene:trem / 42392 FlyBaseID:FBgn0038767 Length:439 Species:Drosophila melanogaster


Alignment Length:401 Identity:92/401 - (22%)
Similarity:155/401 - (38%) Gaps:75/401 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ICRTCGKNVTNLQGRATKLFNK-SNYHFISILENITDMYLEFDTTLPHLICQCCKVQLDRILTFR 70
            :||.|..|.:..:.....:|:: ::.....:|.....:.:..|...|..:|..|...|.....||
  Fly    11 VCRVCLNNPSEGEELLHDIFSETASTRLDQMLHICAGIPVSLDDNFPDKMCSKCVRCLRLCYKFR 75

  Fly    71 NKCLEVHKSFM------AANRKLLRKKAI--VDEELDKPDVEKLQQDLWDHTDQEMCVAMAD--- 124
            ..|...|:..|      |:|.....:..:  :.|:|....|.|..:|.....|..|.|...:   
  Fly    76 LTCQRSHQHIMDMLDREASNANAAGEGDLLSIAEDLSVESVLKSWEDYASQLDGGMKVEGEEDQQ 140

  Fly   125 ---TAGLLREDHNDNEKAKDAEDATQNEKNQEEQVQ----------------------------- 157
               ...::.:...|:....|..|.||...|:.|:.:                             
  Fly   141 HQVITYVVEDGDTDDTNMFDVHDPTQPVPNEIEEAETYAEYEEYELLTNENSPEIAQEKGSTGTD 205

  Fly   158 VQTEE-----------------------VEHCQEQ------LHNMSIISKGVSARVPKRTKRNSK 193
            |.|||                       .|.|...      .|..|...:....:|.::.:....
  Fly   206 VATEEPPEEEIAEDILDSDEDYDPTHAKPEKCDRSGRKPVAYHKNSPKVETFKKKVGRKPRNKLS 270

  Fly   194 SWFCDQCGGVFKSSTYLKLHLQRHSGHKPFACDICQAKYYTDNEMRRHRILHTDARPYACRFCSK 258
            ::.||.||.::.:...|..|::.|||.||..|:||...:..:.::.||...||..|||.|.:|..
  Fly   271 TYICDVCGNIYPTQARLTEHMKFHSGVKPHECEICGRGFVQNQQLVRHMNTHTGNRPYKCNYCPA 335

  Fly   259 TYRGCSSKVVHERTHTNERPFQCQHCDKAFTSTSTRQKHEMLHTNQRKYHCEICDQWFLRSSHLT 323
            .:...|:|..|.|.||.|||:.|..|.:.||.:...:.|:|:||.::.:.|::|.:.|:::..|.
  Fly   336 AFADRSTKTKHHRIHTKERPYVCDVCSRTFTYSDNLKFHKMIHTGEKPHVCDLCGKGFVKAYKLR 400

  Fly   324 LHQSTKLHQRR 334
            ||:.|  |.||
  Fly   401 LHRET--HNRR 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31441NP_731558.1 zf-AD 7..82 CDD:285071 16/81 (20%)
COG5048 <174..337 CDD:227381 52/161 (32%)
C2H2 Zn finger 197..217 CDD:275370 6/19 (32%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
zf-H2C2_2 268..290 CDD:290200 10/21 (48%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
C2H2 Zn finger 309..328 CDD:275368 6/18 (33%)
tremNP_650861.1 zf-AD 11..87 CDD:214871 15/75 (20%)
COG5048 <264..411 CDD:227381 50/148 (34%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
zf-H2C2_2 287..311 CDD:290200 10/23 (43%)
C2H2 Zn finger 302..322 CDD:275368 5/19 (26%)
zf-H2C2_2 315..338 CDD:290200 9/22 (41%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
zf-H2C2_2 345..367 CDD:290200 10/21 (48%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
zf-H2C2_2 370..394 CDD:290200 6/23 (26%)
C2H2 Zn finger 386..406 CDD:275368 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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