DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2e and AT5G06480

DIOPT Version :9

Sequence 1:NP_731439.2 Gene:Npc2e / 326136 FlyBaseID:FBgn0051410 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_196266.1 Gene:AT5G06480 / 830536 AraportID:AT5G06480 Length:153 Species:Arabidopsis thaliana


Alignment Length:165 Identity:36/165 - (21%)
Similarity:62/165 - (37%) Gaps:37/165 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VTLALILATVNATNVQQCKNKPFPLDVNIKDCEEPPCVVYKGTIAVMEVHFLGNNNNIKSITATT 70
            |.|.|:::.:.|.:|..|:... ..:|.:|:.:..|..:..|..|..            :|:|.|
plant    13 VFLLLLVSPIVAIDVHYCEENA-EYEVKVKEVDISPNPIAPGEPATF------------TISANT 64

  Fly    71 TAKV----LGMNLPY---ALPDEVSDVCRNLLYGAICPIDKDEDVTYQFNFYVEPS--FPEITAD 126
            ..::    |.:.:.|   .:..|..|:|..    ..|||...:       |.|..|  .|..|..
plant    65 GREISFGKLVIEVSYFGWHVHSETHDLCTE----TSCPIQTGD-------FLVAHSQVLPGYTPP 118

  Fly   127 VTVTLN----DAQNEPITCFVVSCKIRKGATAAQM 157
            .:..|.    ||:.:.:||...|..|...|:.|.:
plant   119 GSYLLKMKMLDAKKKELTCIKFSFDIGLRASVADI 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2eNP_731439.2 ML 20..144 CDD:294195 28/136 (21%)
AT5G06480NP_196266.1 PG-PI_TP 27..142 CDD:238459 28/138 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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