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Protein Alignment Npc2e and npc2
DIOPT Version :9
Sequence 1: | NP_731439.2 |
Gene: | Npc2e / 326136 |
FlyBaseID: | FBgn0051410 |
Length: | 168 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012823720.1 |
Gene: | npc2 / 493351 |
XenbaseID: | XB-GENE-6258064 |
Length: | 156 |
Species: | Xenopus tropicalis |
Alignment Length: | 152 |
Identity: | 39/152 - (25%) |
Similarity: | 72/152 - (47%) |
Gaps: | 12/152 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLRIVVTLALILATV-NATNVQQC---KNKPFPLDVNIKDCEEPPCVVYKGTIAVMEVHFLGNNN 61
:|.:::|:.|:.::| .....:.| ..|...|||: .|.|.||.:.:|:...:...|:.|.|
Frog 10 LLTVLLTVFLLPSSVPEPLKYKDCGSQSGKLVTLDVS--PCPEEPCPLVRGSTYTVNATFVSNVN 72
Fly 62 NIKSITATTTAKVLGMNLPYALPDEVSDVCRNLLYGAICPIDKDEDVTYQFNFYVEPSFPEITAD 126
: ||.:|.....:.|:.:|: |....|.|:: |..|||:..:..||.....::..:|.|...
Frog 73 S-KSASAVVHGIIAGIAVPF--PISEPDGCKS---GISCPINSGQTYTYVTKLPIKSEYPCIKLV 131
Fly 127 VTVTLNDAQNEPITCFVVSCKI 148
|...|.|..|:.:.|:::...|
Frog 132 VKWQLQDENNKDLFCWLIPVHI 153
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Npc2e | NP_731439.2 |
ML |
20..144 |
CDD:294195 |
34/126 (27%) |
npc2 | XP_012823720.1 |
Npc2_like |
30..151 |
CDD:238458 |
34/128 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1612792at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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