DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2e and npc2

DIOPT Version :9

Sequence 1:NP_731439.2 Gene:Npc2e / 326136 FlyBaseID:FBgn0051410 Length:168 Species:Drosophila melanogaster
Sequence 2:XP_012823720.1 Gene:npc2 / 493351 XenbaseID:XB-GENE-6258064 Length:156 Species:Xenopus tropicalis


Alignment Length:152 Identity:39/152 - (25%)
Similarity:72/152 - (47%) Gaps:12/152 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRIVVTLALILATV-NATNVQQC---KNKPFPLDVNIKDCEEPPCVVYKGTIAVMEVHFLGNNN 61
            :|.:::|:.|:.::| .....:.|   ..|...|||:  .|.|.||.:.:|:...:...|:.|.|
 Frog    10 LLTVLLTVFLLPSSVPEPLKYKDCGSQSGKLVTLDVS--PCPEEPCPLVRGSTYTVNATFVSNVN 72

  Fly    62 NIKSITATTTAKVLGMNLPYALPDEVSDVCRNLLYGAICPIDKDEDVTYQFNFYVEPSFPEITAD 126
            : ||.:|.....:.|:.:|:  |....|.|::   |..|||:..:..||.....::..:|.|...
 Frog    73 S-KSASAVVHGIIAGIAVPF--PISEPDGCKS---GISCPINSGQTYTYVTKLPIKSEYPCIKLV 131

  Fly   127 VTVTLNDAQNEPITCFVVSCKI 148
            |...|.|..|:.:.|:::...|
 Frog   132 VKWQLQDENNKDLFCWLIPVHI 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2eNP_731439.2 ML 20..144 CDD:294195 34/126 (27%)
npc2XP_012823720.1 Npc2_like 30..151 CDD:238458 34/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1612792at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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