DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2e and Npc2a

DIOPT Version :9

Sequence 1:NP_731439.2 Gene:Npc2e / 326136 FlyBaseID:FBgn0051410 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster


Alignment Length:158 Identity:43/158 - (27%)
Similarity:66/158 - (41%) Gaps:19/158 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLR-IVVTLALILATVNATNVQQCKNKPFPLD-VNIKDCE--EPPCVVYKGTIAVMEVHFLGNNN 61
            ||| .|:..|.::....|.....|.:|..... |.|:.|:  :..|::.:.|.....:.|.    
  Fly     1 MLRYAVIACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKRNTTVSFSIDFA---- 61

  Fly    62 NIKSITATTT---AKVLGMNLPYAL--PDEVSDVCRNLLYGAICPIDKDEDVTYQFNFYVEPSFP 121
            ..:..||..|   .||||:.:|:.|  ||...|      .|..||::|||...|.....|..|:|
  Fly    62 LAEEATAVKTVVHGKVLGIEMPFPLANPDACVD------SGLKCPLEKDESYRYTATLPVLRSYP 120

  Fly   122 EITADVTVTLNDAQNEPITCFVVSCKIR 149
            :::..|...|.|.....|.|..:..||:
  Fly   121 KVSVLVKWELQDQDGADIICVEIPAKIQ 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2eNP_731439.2 ML 20..144 CDD:294195 35/131 (27%)
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 35/133 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451273
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4063
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1612792at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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